Information for 11-TGAGCAGCCATTG (Motif 17)

C A G T A C T G G T C A A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C T G
Reverse Opposite:
G T A C C G T A C G T A A C G T A C T G A C T G A G T C A C G T A C T G G T A C A C G T A G T C G C T A
p-value:1e-9
log p-value:-2.115e+01
Information Content per bp:1.928
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.6 +/- 15.8bp
Average Position of motif in Background81.3 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TGAGCAGCCATTG--
---GCNGCCATCTTG
 C A G T A C T G G T C A A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

YY2/MA0748.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGAGCAGCCATTG
--GTCCGCCATTA
 C A G T A C T G G T C A A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C T G
A C G T A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGAGCAGCCATTG-
--ACTAGCCAATCA
 C A G T A C T G G T C A A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C T G A C G T
A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TGAGCAGCCATTG
---GCAGTGATTT
 C A G T A C T G G T C A A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C T G
A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.58
Offset:7
Orientation:forward strand
Alignment:TGAGCAGCCATTG----
-------CCATTGTTYB
 C A G T A C T G G T C A A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGAGCAGCCATTG--
AGGGAAGTCATTTCT
 C A G T A C T G G T C A A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C T G A C G T A C G T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

YY1(Zf)/Promoter/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGAGCAGCCATTG--
---GCCGCCATCTTG
 C A G T A C T G G T C A A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

SOX9/MA0077.1/Jaspar

Match Rank:8
Score:0.57
Offset:7
Orientation:forward strand
Alignment:TGAGCAGCCATTG---
-------CCATTGTTC
 C A G T A C T G G T C A A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.57
Offset:7
Orientation:forward strand
Alignment:TGAGCAGCCATTG--
-------CCTTTGTT
 C A G T A C T G G T C A A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.57
Offset:7
Orientation:forward strand
Alignment:TGAGCAGCCATTG--
-------CCWTTGTY
 C A G T A C T G G T C A A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T