Information for 7-CGTGCGCGTA (Motif 15)

A G T C A C T G A C G T A C T G A G T C A C T G A G T C A C T G A C G T G C T A
Reverse Opposite:
C G A T C G T A G T A C C T A G A G T C C T A G A G T C C G T A A G T C A C T G
p-value:1e-9
log p-value:-2.262e+01
Information Content per bp:1.860
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif12.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets51.1 +/- 32.6bp
Average Position of motif in Background65.2 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EGR2/MA0472.2/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CGTGCGCGTA
TGCGTGGGCGT-
 A C G T A C G T A G T C A C T G A C G T A C T G A G T C A C T G A G T C A C T G A C G T G C T A
G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CGTGCGCGTA--
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C T G A G T C A C T G A G T C A C T G A C G T G C T A A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

EGR4/MA0733.1/Jaspar

Match Rank:3
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----CGTGCGCGTA-
AANTGCGTGGGCGTNN
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C T G A G T C A C T G A G T C A C T G A C G T G C T A A C G T
C G T A C G T A C G T A A C G T T C A G T A G C T C A G C A G T T C A G A C T G T C A G G T A C T C A G C A G T C T G A C T G A

EGR3/MA0732.1/Jaspar

Match Rank:4
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----CGTGCGCGTA-
ANTGCGTGGGCGTNN
 A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C T G A G T C A C T G A G T C A C T G A C G T G C T A A C G T
C G T A C T A G G A C T C T A G A G T C T A C G A C G T T C A G C T A G A T C G G A T C C T A G C A G T C T G A C T A G

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CGTGCGCGTA
GGACGTGC-----
 A C G T A C G T A C G T A G T C A C T G A C G T A C T G A G T C A C T G A G T C A C T G A C G T G C T A
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:6
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CGTGCGCGTA
RTACGTGC-----
 A C G T A C G T A C G T A G T C A C T G A C G T A C T G A G T C A C T G A G T C A C T G A C G T G C T A
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:7
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CGTGCGCGTA
NGCGTGGGCGGR
 A C G T A C G T A G T C A C T G A C G T A C T G A G T C A C T G A G T C A C T G A C G T G C T A
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

Hes1/MA1099.1/Jaspar

Match Rank:8
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CGTGCGCGTA
NNCGCGTGNN----
 A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C T G A G T C A C T G A G T C A C T G A C G T G C T A
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CGTGCGCGTA
TACGTGCV----
 A C G T A C G T A G T C A C T G A C G T A C T G A G T C A C T G A G T C A C T G A C G T G C T A
A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CGTGCGCGTA
CAACGTCCGCGG-
 A C G T A C G T A C G T A G T C A C T G A C G T A C T G A G T C A C T G A G T C A C T G A C G T G C T A
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T