p-value: | 1e-10 |
log p-value: | -2.380e+01 |
Information Content per bp: | 1.838 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.69% |
Number of Background Sequences with motif | 4.0 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 59.2 +/- 25.1bp |
Average Position of motif in Background | 46.3 +/- 5.7bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0164.1_Smad3_2/Jaspar
Match Rank: | 1 |
Score: | 0.61 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CCCCGCCTGDGTGACA TACGCCCCGCCACTCTG--- |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 2 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCCCGCCTGDGTGACA GTCATGCHTGRCTGS-- |
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Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer
Match Rank: | 3 |
Score: | 0.59 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CCCCGCCTGDGTGACA-- ------BTGABTGACAGS |
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Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer
Match Rank: | 4 |
Score: | 0.58 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CCCCGCCTGDGTGACA-- ------NTGATTGACAGN |
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PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer
Match Rank: | 5 |
Score: | 0.56 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | CCCCGCCTGDGTGACA--- -------TGAGTGACAGSC |
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PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 6 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CCCCGCCTGDGTGACA -TCAGNGAGCGTGAC- |
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PB0107.1_Ascl2_2/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CCCCGCCTGDGTGACA CTATCCCCGCCCTATT---- |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 8 |
Score: | 0.53 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CCCCGCCTGDGTGACA CCACACAGCAGGAGA---- |
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PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 9 |
Score: | 0.53 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCCCGCCTGDGTGACA NGTCACGCTTGGCTGC-- |
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ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 10 |
Score: | 0.52 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCCCGCCTGDGTGACA TGCCCAGNHW-------- |
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