Information for 3-GTGCGTGTAAAGG (Motif 5)

A C T G A C G T A C T G A G T C A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C G T A C G T C G T A A G T C C G T A A G T C A C T G A G T C C G T A A G T C
p-value:1e-17
log p-value:-4.063e+01
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif3.00%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.9 +/- 28.7bp
Average Position of motif in Background58.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTGCGTGTAAAGG
TTGCGTGCVA---
 A C T G A C G T A C T G A G T C A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C T G A C T G
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GTGCGTGTAAAGG
-TGCGTG------
 A C T G A C G T A C T G A G T C A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C T G A C T G
A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTGCGTGTAAAGG
-TAGGTGTGAAG-
 A C T G A C G T A C T G A G T C A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C T G A C T G
A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T

GCM2/MA0767.1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GTGCGTGTAAAGG
TATGCGGGTA----
 A C G T A C T G A C G T A C T G A G T C A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C T G A C T G
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GTGCGTGTAAAGG---
----ANGNAAAGGTCA
 A C T G A C G T A C T G A G T C A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

TATA-Box(TBP)/Promoter/Homer

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GTGCGTGTAAAGG-
--GNCTATAAAAGG
 A C T G A C G T A C T G A G T C A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C T G A C T G A C G T
A C G T A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GTGCGTGTAAAGG
GGACGTGC-----
 A C T G A C G T A C T G A G T C A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C T G A C T G
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GTGCGTGTAAAGG
CATGCGGGTAC---
 A C G T A C T G A C G T A C T G A G T C A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C T G A C T G
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GTGCGTGTAAAGG
-AAGGTGTGAAA-
 A C T G A C G T A C T G A G T C A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C T G A C T G
A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T

MYBL2/MA0777.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GTGCGTGTAAAGG--
GACNGTTTAACGGTT
 A C T G A C G T A C T G A G T C A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C T G A C T G A C G T A C G T
C T A G C T G A T A G C T A G C A C T G C G A T A C G T G C A T C T G A G T C A G A T C A T C G A C T G G A C T G A C T