p-value: | 1e-4 |
log p-value: | -1.123e+01 |
Information Content per bp: | 1.929 |
Number of Target Sequences with motif | 2.0 |
Percentage of Target Sequences with motif | 0.86% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 19.3 +/- 14.6bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.50 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0171.1_Nkx2-1/Jaspar
Match Rank: | 1 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --ACCCACTAGACGA- TAAGCCACTTGAAATT |
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PH0113.1_Nkx2-4/Jaspar
Match Rank: | 2 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --ACCCACTAGACGA- TAAGCCACTTGAAATT |
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PH0111.1_Nkx2-2/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --ACCCACTAGACGA-- ATAACCACTTGAAAATT |
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NKX2-3/MA0672.1/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | ACCCACTAGACGA -ACCACTTGAA-- |
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NKX2-8/MA0673.1/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | ACCCACTAGACGA --CCACTTGAA-- |
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PB0048.1_Nkx3-1_1/Jaspar
Match Rank: | 6 |
Score: | 0.57 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ACCCACTAGACGA- CTTAACCACTTAAGGAT |
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Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer
Match Rank: | 7 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ACCCACTAGACGA -NSCACTYVAV-- |
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PH0115.1_Nkx2-6/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --ACCCACTAGACGA- TAAGCCACTTAACATT |
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PH0114.1_Nkx2-5/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --ACCCACTAGACGA- TAAGCCACTTGAATTT |
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ZNF354C/MA0130.1/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ACCCACTAGACGA ATCCAC------- |
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