Information for 2-GGGAACCTCGGCA (Motif 4)

A T C G A C T G C T A G C G T A C G T A A G T C A G T C A C G T A G T C A C T G A C T G A T G C C G T A
Reverse Opposite:
C G A T A T C G A G T C A G T C T C A G G T C A A C T G A C T G C G A T A C G T A G T C A G T C A T G C
p-value:1e-14
log p-value:-3.338e+01
Information Content per bp:1.841
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.6 +/- 21.2bp
Average Position of motif in Background62.1 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0159.1_Rfx4_2/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGGAACCTCGGCA
NNNGTAACTANGNNA
 A C G T A C G T A T C G A C T G C T A G C G T A C G T A A G T C A G T C A C G T A G T C A C T G A C T G A T G C C G T A
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

PB0162.1_Sfpi1_2/Jaspar

Match Rank:2
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------GGGAACCTCGGCA
CAAATTCCGGAACC------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G C T A G C G T A C G T A A G T C A G T C A C G T A G T C A C T G A C T G A T G C C G T A
G T A C G C T A C T G A G C T A G C A T C G A T G T A C T G A C T C A G T C A G C G T A G C T A G T A C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGGAACCTCGGCA
CGGAGC-------
 A T C G A C T G C T A G C G T A C G T A A G T C A G T C A C G T A G T C A C T G A C T G A T G C C G T A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GGGAACCTCGGCA
---WDNCTGGGCA
 A T C G A C T G C T A G C G T A C G T A A G T C A G T C A C G T A G T C A C T G A C T G A T G C C G T A
A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGGAACCTCGGCA
TGGAACAGMA---
 A T C G A C T G C T A G C G T A C G T A A G T C A G T C A C G T A G T C A C T G A C T G A T G C C G T A
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T

Znf423/MA0116.1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GGGAACCTCGGCA---
-GGCACCCAGGGGTGC
 A T C G A C T G C T A G C G T A C G T A A G T C A G T C A C G T A G T C A C T G A C T G A T G C C G T A A C G T A C G T A C G T
A C G T T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GGGAACCTCGGCA
DCCGGAARYN-----
 A C G T A C G T A T C G A C T G C T A G C G T A C G T A A G T C A G T C A C G T A G T C A C T G A C T G A T G C C G T A
C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G A C G T A C G T A C G T A C G T A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GGGAACCTCGGCA
RCCGGAARYN-----
 A C G T A C G T A T C G A C T G C T A G C G T A C G T A A G T C A G T C A C G T A G T C A C T G A C T G A T G C C G T A
T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G A C G T A C G T A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GGGAACCTCGGCA
AGAGGAA--------
 A C G T A C G T A T C G A C T G C T A G C G T A C G T A A G T C A G T C A C G T A G T C A C T G A C T G A T G C C G T A
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:-8
Orientation:reverse strand
Alignment:--------GGGAACCTCGGCA----
RGGCAMTAGGGAGCCATRGAAGGTK
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G C T A G C G T A C G T A A G T C A G T C A C G T A G T C A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T
C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T