Information for 12-GTAATCCTTG (Motif 38)

C T A G A C G T G T C A C G T A A G C T A G T C A G T C A G C T A G C T A C T G
Reverse Opposite:
A G T C C T G A C T G A C T A G T C A G C T G A A C G T A C G T G T C A A G T C
p-value:1e-7
log p-value:-1.817e+01
Information Content per bp:1.783
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.68%
Number of Background Sequences with motif240.0
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets50.5 +/- 30.0bp
Average Position of motif in Background53.5 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GTAATCCTTG
-TAATCCCN-
 C T A G A C G T G T C A C G T A A G C T A G T C A G T C A G C T A G C T A C T G
A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GTAATCCTTG
NYTAATCCYB-
 A C G T C T A G A C G T G T C A C G T A A G C T A G T C A G T C A G C T A G C T A C T G
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GTAATCCTTG
YTAATCCY--
 C T A G A C G T G T C A C G T A A G C T A G T C A G T C A G C T A G C T A C T G
G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GTAATCCTTG
TTAATCCT--
 C T A G A C G T G T C A C G T A A G C T A G T C A G T C A G C T A G C T A C T G
G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GTAATCCTTG
GCTAATCCCC-
 A C G T C T A G A C G T G T C A C G T A A G C T A G T C A G T C A G C T A G C T A C T G
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GTAATCCTTG
TTAATCCC--
 C T A G A C G T G T C A C G T A A G C T A G T C A G T C A G C T A G C T A C T G
G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GTAATCCTTG
CCTAATCCGC-
 A C G T C T A G A C G T G T C A C G T A A G C T A G T C A G T C A G C T A G C T A C T G
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GTAATCCTTG
CTTAATCCC--
 A C G T C T A G A C G T G T C A C G T A A G C T A G T C A G T C A G C T A G C T A C T G
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GTAATCCTTG
TTAATCCG--
 C T A G A C G T G T C A C G T A A G C T A G T C A G T C A G C T A G C T A C T G
G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:10
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GTAATCCTTG
GCTAATCC---
 A C G T C T A G A C G T G T C A C G T A A G C T A G T C A G T C A G C T A G C T A C T G
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T