Information for 3-KATTTAGCAGAGC (Motif 3)

A C G T G T C A A C G T A C G T A C G T C T G A A C T G A G T C C G T A A C T G C G T A A C T G A T G C
Reverse Opposite:
A T C G A G T C A C G T A G T C C G A T C T A G G T A C A G C T G T C A G T C A C G T A A C G T G T C A
p-value:1e-16
log p-value:-3.701e+01
Information Content per bp:1.812
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.7 +/- 26.6bp
Average Position of motif in Background58.7 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:KATTTAGCAGAGC
-------CGGAGC
 A C G T G T C A A C G T A C G T A C G T C T G A A C T G A G T C C G T A A C T G C G T A A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.56
Offset:9
Orientation:forward strand
Alignment:KATTTAGCAGAGC-
---------CAGCC
 A C G T G T C A A C G T A C G T A C G T C T G A A C T G A G T C C G T A A C T G C G T A A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

DMRT3/MA0610.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:KATTTAGCAGAGC
AATGTATCAAT--
 A C G T G T C A A C G T A C G T A C G T C T G A A C T G A G T C C G T A A C T G C G T A A C T G A T G C
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T A C G T

PH0036.1_Gsx2/Jaspar

Match Rank:4
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----KATTTAGCAGAGC
AGGTTAATTAGCTGAT-
 A C G T A C G T A C G T A C G T A C G T G T C A A C G T A C G T A C G T C T G A A C T G A G T C C G T A A C T G C G T A A C T G A T G C
T C G A T A C G C T A G A G C T G A C T G T C A C G T A C G A T A C G T C T G A T C A G G A T C A G C T A T C G C T G A C A G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:KATTTAGCAGAGC----
NNNAGATCAAAGGANNN
 A C G T G T C A A C G T A C G T A C G T C T G A A C T G A G T C C G T A A C T G C G T A A C T G A T G C A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.49
Offset:0
Orientation:forward strand
Alignment:KATTTAGCAGAGC----
TATAGATCAAAGGAAAA
 A C G T G T C A A C G T A C G T A C G T C T G A A C T G A G T C C G T A A C T G C G T A A C T G A T G C A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0040.1_Lef1_1/Jaspar

Match Rank:7
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:KATTTAGCAGAGC----
NANAGATCAAAGGGNNN
 A C G T G T C A A C G T A C G T A C G T C T G A A C T G A G T C C G T A A C T G C G T A A C T G A T G C A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

HOXC13/MA0907.1/Jaspar

Match Rank:8
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:KATTTAGCAGAGC
NTTTTACGAGN--
 A C G T G T C A A C G T A C G T A C G T C T G A A C T G A G T C C G T A A C T G C G T A A C T G A T G C
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:9
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:KATTTAGCAGAGC
TTTTTATTGG---
 A C G T G T C A A C G T A C G T A C G T C T G A A C T G A G T C C G T A A C T G C G T A A C T G A T G C
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T

PH0103.1_Meox1/Jaspar

Match Rank:10
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----KATTTAGCAGAGC
GAGGTAATTACCTCAG-
 A C G T A C G T A C G T A C G T A C G T G T C A A C G T A C G T A C G T C T G A A C T G A G T C C G T A A C T G C G T A A C T G A T G C
T C A G T G C A C A T G C A T G G A C T T G C A G C T A C A G T A C G T C T G A A T G C G T A C G A C T A G T C C G T A C T A G A C G T