Information for 20-GGCCGGTGTGAGGCAA (Motif 28)

A T C G A T C G A T G C G A T C C T A G A T C G A C G T A C T G C G A T A T C G C T G A C T A G T C A G A T G C G T C A G C T A
Reverse Opposite:
C G A T A C G T A T C G A G T C A G T C A G C T A T G C C G T A A G T C T C G A T A G C A G T C C A T G A T C G A T G C A T G C
p-value:1e-9
log p-value:-2.076e+01
Information Content per bp:1.701
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif13.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets63.8 +/- 23.9bp
Average Position of motif in Background40.8 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GGCCGGTGTGAGGCAA
---AGGTGNCAGACAG
 A T C G A T C G A T G C G A T C C T A G A T C G A C G T A C T G C G A T A T C G C T G A C T A G T C A G A T G C G T C A G C T A
A C G T A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

MGA/MA0801.1/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGCCGGTGTGAGGCAA
---AGGTGTGA-----
 A T C G A T C G A T G C G A T C C T A G A T C G A C G T A C T G C G A T A T C G C T G A C T A G T C A G A T G C G T C A G C T A
A C G T A C G T A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGCCGGTGTGAGGCAA
---AGGTGTGA-----
 A T C G A T C G A T G C G A T C C T A G A T C G A C G T A C T G C G A T A T C G C T G A C T A G T C A G A T G C G T C A G C T A
A C G T A C G T A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGCCGGTGTGAGGCAA
---AGGTGTGA-----
 A T C G A T C G A T G C G A T C C T A G A T C G A C G T A C T G C G A T A T C G C T G A C T A G T C A G A T G C G T C A G C T A
A C G T A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGCCGGTGTGAGGCAA
---AGGTGHCAGACA-
 A T C G A T C G A T G C G A T C C T A G A T C G A C G T A C T G C G A T A T C G C T G A C T A G T C A G A T G C G T C A G C T A
A C G T A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T

TBX4/MA0806.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GGCCGGTGTGAGGCAA
---AGGTGTGA-----
 A T C G A T C G A T G C G A T C C T A G A T C G A C G T A C T G C G A T A T C G C T G A C T A G T C A G A T G C G T C A G C T A
A C G T A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GGCCGGTGTGAGGCAA
---AGGTGTGA-----
 A T C G A T C G A T G C G A T C C T A G A T C G A C G T A C T G C G A T A T C G C T G A C T A G T C A G A T G C G T C A G C T A
A C G T A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GGCCGGTGTGAGGCAA
--TAGGTGTGAAG---
 A T C G A T C G A T G C G A T C C T A G A T C G A C G T A C T G C G A T A T C G C T G A C T A G T C A G A T G C G T C A G C T A
A C G T A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GGCCGGTGTGAGGCAA
----VBTGWCAGCB--
 A T C G A T C G A T G C G A T C C T A G A T C G A C G T A C T G C G A T A T C G C T G A C T A G T C A G A T G C G T C A G C T A
A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GGCCGGTGTGAGGCAA
--CAGGTGAGG-----
 A T C G A T C G A T G C G A T C C T A G A T C G A C G T A C T G C G A T A T C G C T G A C T A G T C A G A T G C G T C A G C T A
A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T