Information for 16-TTGTGAGGCCATGGYC (Motif 24)

A C G T A C G T A T C G A C G T A C T G C T G A A T C G C T A G A G T C G A T C G C T A C G A T A C T G C T A G A G C T G T A C
Reverse Opposite:
C A T G T C G A G A T C G T A C C G T A C A G T C A T G A C T G A G T C A T G C A G C T T A G C T C G A A T G C G T C A C G T A
p-value:1e-10
log p-value:-2.405e+01
Information Content per bp:1.718
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.0 +/- 22.6bp
Average Position of motif in Background75.4 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TTGTGAGGCCATGGYC--
----CAGGCCNNGGCCNN
 A C G T A C G T A T C G A C G T A C T G C T G A A T C G C T A G A G T C G A T C G C T A C G A T A C T G C T A G A G C T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TTGTGAGGCCATGGYC
-----AGGCCTNG---
 A C G T A C G T A T C G A C G T A C T G C T G A A T C G C T A G A G T C G A T C G C T A C G A T A C T G C T A G A G C T G T A C
A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:TTGTGAGGCCATGGYC
-----TGACCTTGAN-
 A C G T A C G T A T C G A C G T A C T G C T G A A T C G C T A G A G T C G A T C G C T A C G A T A C T G C T A G A G C T G T A C
A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TTGTGAGGCCATGGYC
-----AGGCCTAG---
 A C G T A C G T A T C G A C G T A C T G C T G A A T C G C T A G A G T C G A T C G C T A C G A T A C T G C T A G A G C T G T A C
A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:5
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:TTGTGAGGCCATGGYC-
-----TGACCTTGACCT
 A C G T A C G T A T C G A C G T A C T G C T G A A T C G C T A G A G T C G A T C G C T A C G A T A C T G C T A G A G C T G T A C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--TTGTGAGGCCATGGYC
AGGTGHCAGACA------
 A C G T A C G T A C G T A C G T A T C G A C G T A C T G C T G A A T C G C T A G A G T C G A T C G C T A C G A T A C T G C T A G A G C T G T A C
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:7
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:TTGTGAGGCCATGGYC-
-----TGACCTTGACCT
 A C G T A C G T A T C G A C G T A C T G C T G A A T C G C T A G A G T C G A T C G C T A C G A T A C T G C T A G A G C T G T A C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TTGTGAGGCCATGGYC--
---GCTGACCTTGAACTN
 A C G T A C G T A T C G A C G T A C T G C T G A A T C G C T A G A G T C G A T C G C T A C G A T A C T G C T A G A G C T G T A C A C G T A C G T
A C G T A C G T A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:TTGTGAGGCCATGGYC
----AAAACAATGG--
 A C G T A C G T A T C G A C G T A C T G C T G A A T C G C T A G A G T C G A T C G C T A C G A T A C T G C T A G A G C T G T A C
A C G T A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:10
Score:0.49
Offset:2
Orientation:forward strand
Alignment:TTGTGAGGCCATGGYC-
--CTCACACAATGGCGC
 A C G T A C G T A T C G A C G T A C T G C T G A A T C G C T A G A G T C G A T C G C T A C G A T A C T G C T A G A G C T G T A C A C G T
A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C