Information for 8-TKCAAATCAGAWTTGG (Motif 11)

A C G T A C T G A G T C C G T A C G T A C G T A C G A T A G T C C G T A C T A G C G T A G C A T C A G T G A C T T C A G C T A G
Reverse Opposite:
A G T C A G T C C G T A G C T A C G T A C G A T A G T C A C G T A C T G C G T A A C G T A C G T A C G T T A C G T G A C C G T A
p-value:1e-13
log p-value:-3.091e+01
Information Content per bp:1.758
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.9 +/- 26.4bp
Average Position of motif in Background38.2 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TKCAAATCAGAWTTGG
--CAAATCACTG----
 A C G T A C T G A G T C C G T A C G T A C G T A C G A T A G T C C G T A C T A G C G T A G C A T C A G T G A C T T C A G C T A G
A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TKCAAATCAGAWTTGG
WATGCAAATGAG------
 A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G A T A G T C C G T A C T A G C G T A G C A T C A G T G A C T T C A G C T A G
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TKCAAATCAGAWTTGG
TTGTATGCAAATTAGA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G A T A G T C C G T A C T A G C G T A G C A T C A G T G A C T T C A G C T A G
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T A C G T A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TKCAAATCAGAWTTGG
TTGTATGCAAATTAGA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G A T A G T C C G T A C T A G C G T A G C A T C A G T G A C T T C A G C T A G
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T A C G T A C G T A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TKCAAATCAGAWTTGG
TTGTATGCAAATTAGA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G A T A G T C C G T A C T A G C G T A G C A T C A G T G A C T T C A G C T A G
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TKCAAATCAGAWTTGG
ATATGCAAATNNN------
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G A T A G T C C G T A C T A G C G T A G C A T C A G T G A C T T C A G C T A G
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TKCAAATCAGAWTTGG
AATATGCAAATTAG------
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G A T A G T C C G T A C T A G C G T A G C A T C A G T G A C T T C A G C T A G
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TKCAAATCAGAWTTGG
AAGGCGAAATCATCGCA--
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G A T A G T C C G T A C T A G C G T A G C A T C A G T G A C T T C A G C T A G
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TKCAAATCAGAWTTGG
TATGCWAATBAV------
 A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G A T A G T C C G T A C T A G C G T A G C A T C A G T G A C T T C A G C T A G
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TKCAAATCAGAWTTGG
TTATGCAAAT---------
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G A T A G T C C G T A C T A G C G T A G C A T C A G T G A C T T C A G C T A G
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T