Information for 23-ATTTCAGACACTTAAA (Motif 38)

G T C A A C G T A C G T A C G T A G T C C G T A A C T G C G T A G T A C G T C A A G T C A C G T A G C T C T G A C T G A C G T A
Reverse Opposite:
C G A T A G C T A G C T C T G A C G T A A C T G A C G T A C T G A C G T A G T C A C G T A C T G C G T A C G T A C G T A A C G T
p-value:1e-7
log p-value:-1.727e+01
Information Content per bp:1.915
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.8 +/- 28.4bp
Average Position of motif in Background21.6 +/- 4.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0171.1_Nkx2-1/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ATTTCAGACACTTAAA---
---TAAGCCACTTGAAATT
 G T C A A C G T A C G T A C G T A G T C C G T A A C T G C G T A G T A C G T C A A G T C A C G T A G C T C T G A C T G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

PH0115.1_Nkx2-6/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ATTTCAGACACTTAAA---
---TAAGCCACTTAACATT
 G T C A A C G T A C G T A C G T A G T C C G T A A C T G C G T A G T A C G T C A A G T C A C G T A G C T C T G A C T G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

PH0114.1_Nkx2-5/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ATTTCAGACACTTAAA---
---TAAGCCACTTGAATTT
 G T C A A C G T A C G T A C G T A G T C C G T A A C T G C G T A G T A C G T C A A G T C A C G T A G C T C T G A C T G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

PH0113.1_Nkx2-4/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:ATTTCAGACACTTAAA---
---TAAGCCACTTGAAATT
 G T C A A C G T A C G T A C G T A G T C C G T A A C T G C G T A G T A C G T C A A G T C A C G T A G C T C T G A C T G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:ATTTCAGACACTTAAA
-----AASCACTCAA-
 G T C A A C G T A C G T A C G T A G T C C G T A A C T G C G T A G T A C G T C A A G T C A C G T A G C T C T G A C T G A C G T A
A C G T A C G T A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:ATTTCAGACACTTAAA
-----MRSCACTYAA-
 G T C A A C G T A C G T A C G T A G T C C G T A A C T G C G T A G T A C G T C A A G T C A C G T A G C T C T G A C T G A C G T A
A C G T A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:7
Score:0.57
Offset:6
Orientation:forward strand
Alignment:ATTTCAGACACTTAAA
------ACCACTTAA-
 G T C A A C G T A C G T A C G T A G T C C G T A A C T G C G T A G T A C G T C A A G T C A C G T A G C T C T G A C T G A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:8
Score:0.57
Offset:7
Orientation:forward strand
Alignment:ATTTCAGACACTTAAA
-------CCACTTGAA
 G T C A A C G T A C G T A C G T A G T C C G T A A C T G C G T A G T A C G T C A A G T C A C G T A G C T C T G A C T G A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATTTCAGACACTTAAA
CAAATCCAGACATCACA-
 A C G T A C G T G T C A A C G T A C G T A C G T A G T C C G T A A C T G C G T A G T A C G T C A A G T C A C G T A G C T C T G A C T G A C G T A
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ATTTCAGACACTTAAA
NNTTTTCACACCTTNNN-
 A C G T A C G T G T C A A C G T A C G T A C G T A G T C C G T A A C T G C G T A G T A C G T C A A G T C A C G T A G C T C T G A C T G A C G T A
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C A C G T