Information for 13-GGGCGCCCTCTAG (Motif 37)

A C T G A T C G A C T G A T G C A C T G A T G C A G T C A G T C A G C T A G T C A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A C T G C T G A A C T G A C T G A T C G A G T C A T C G A G T C A T G C A G T C
p-value:1e-7
log p-value:-1.727e+01
Information Content per bp:1.929
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.6 +/- 29.9bp
Average Position of motif in Background47.9 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----GGGCGCCCTCTAG
NNNGGGGCGCCCCCNN-
 A C G T A C G T A C G T A C G T A C T G A T C G A C T G A T G C A C T G A T G C A G T C A G T C A G C T A G T C A C G T C G T A A C T G
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGGCGCCCTCTAG----
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C T G A T C G A C T G A T G C A C T G A T G C A G T C A G T C A G C T A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GGGCGCCCTCTAG
ANCGCGCGCCCTTNN-
 A C G T A C G T A C G T A C T G A T C G A C T G A T G C A C T G A T G C A G T C A G T C A G C T A G T C A C G T C G T A A C T G
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGGCGCCCTCTAG------
TAGCGCCCCCTGGTGGCCA
 A C T G A T C G A C T G A T G C A C T G A T G C A G T C A G T C A G C T A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0008.1_E2F2_1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGGCGCCCTCTAG
NTCGCGCGCCTTNNN-
 A C G T A C G T A C G T A C T G A T C G A C T G A T G C A C T G A T G C A G T C A G T C A G C T A G T C A C G T C G T A A C T G
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T A C G T

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGGCGCCCTCTAG
-GGCGCGCT----
 A C T G A T C G A C T G A T G C A C T G A T G C A G T C A G T C A G C T A G T C A C G T C G T A A C T G
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGGCGCCCTCTAG------
ANAGTGCCACCTGGTGGCCA
 A C G T A C T G A T C G A C T G A T G C A C T G A T G C A G T C A G T C A G C T A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

YY1(Zf)/Promoter/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGGCGCCCTCTAG
-GCCGCCATCTTG
 A C T G A T C G A C T G A T G C A C T G A T G C A G T C A G T C A G C T A G T C A C G T C G T A A C T G
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

PB0095.1_Zfp161_1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGGCGCCCTCTAG-
TGGCGCGCGCGCCTGA
 A C G T A C G T A C T G A T C G A C T G A T G C A C T G A T G C A G T C A G T C A G C T A G T C A C G T C G T A A C T G A C G T
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGGCGCCCTCTAG--
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C T G A T C G A C T G A T G C A C T G A T G C A G T C A G T C A G C T A G T C A C G T C G T A A C T G A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C