Information for 7-CTTCCCTCMGCAGTGT (Motif 12)

A G T C A C G T A G C T A T G C T A G C A G T C G A C T A G T C T G C A A T C G A G T C C T G A C T A G C A G T C T A G C G A T
Reverse Opposite:
C G T A A G T C G C T A G A T C A G C T C T A G A T G C A C G T T C A G C T G A A C T G A T C G A T C G C T G A C G T A C T A G
p-value:1e-10
log p-value:-2.448e+01
Information Content per bp:1.727
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.3 +/- 16.3bp
Average Position of motif in Background60.2 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CTTCCCTCMGCAGTGT-
-----CACAGCAGGGGG
 A G T C A C G T A G C T A T G C T A G C A G T C G A C T A G T C T G C A A T C G A G T C C T G A C T A G C A G T C T A G C G A T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTTCCCTCMGCAGTGT
NYTTCCCGCC-------
 A C G T A G T C A C G T A G C T A T G C T A G C A G T C G A C T A G T C T G C A A T C G A G T C C T G A C T A G C A G T C T A G C G A T
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTTCCCTCMGCAGTGT
NCTTCCCGCCC------
 A C G T A G T C A C G T A G C T A T G C T A G C A G T C G A C T A G T C T G C A A T C G A G T C C T G A C T A G C A G T C T A G C G A T
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTTCCCTCMGCAGTGT
GCTTCC-----------
 A C G T A G T C A C G T A G C T A T G C T A G C A G T C G A C T A G T C T G C A A T C G A G T C C T G A C T A G C A G T C T A G C G A T
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTTCCCTCMGCAGTGT
NNTTCCCGCCC------
 A C G T A G T C A C G T A G C T A T G C T A G C A G T C G A C T A G T C T G C A A T C G A G T C C T G A C T A G C A G T C T A G C G A T
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T A C G T A C G T A C G T A C G T

Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTTCCCTCMGCAGTGT
-ATGACTCAGCANWWT
 A G T C A C G T A G C T A T G C T A G C A G T C G A C T A G T C T G C A A T C G A G T C C T G A C T A G C A G T C T A G C G A T
A C G T T C G A A C G T A C T G C G T A T A G C G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CTTCCCTCMGCAGTGT---
----DCHCAGCAGGRGGCC
 A G T C A C G T A G C T A T G C T A G C A G T C G A C T A G T C T G C A A T C G A G T C C T G A C T A G C A G T C T A G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CTTCCCTCMGCAGTGT
NNACTTGCCTT--------
 A C G T A C G T A C G T A G T C A C G T A G C T A T G C T A G C A G T C G A C T A G T C T G C A A T C G A G T C C T G A C T A G C A G T C T A G C G A T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTTCCCTCMGCAGTGT
-ATGACTCAGCAD---
 A G T C A C G T A G C T A T G C T A G C A G T C G A C T A G T C T G C A A T C G A G T C C T G A C T A G C A G T C T A G C G A T
A C G T T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTTCCCTCMGCAGTGT
-GACCCCCCGCTGTG-
 A G T C A C G T A G C T A T G C T A G C A G T C G A C T A G T C T G C A A T C G A G T C C T G A C T A G C A G T C T A G C G A T
A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T