Information for 1-TCAGTCCAGCGGG (Motif 1)

A C G T G T A C C G T A A C T G A C G T A G T C A G T C C G T A A C T G A T G C A T C G A T C G A C T G
Reverse Opposite:
A G T C A T G C A T G C A T C G A G T C A C G T C T A G A C T G C G T A A G T C A C G T A C T G C G T A
p-value:1e-13
log p-value:-3.186e+01
Information Content per bp:1.907
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.8 +/- 27.1bp
Average Position of motif in Background38.7 +/- 11.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCAGTCCAGCGGG--
SCAGYCADGCATGAC
 A C G T G T A C C G T A A C T G A C G T A G T C A G T C C G T A A C T G A T G C A T C G A T C G A C T G A C G T A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TCAGTCCAGCGGG
---DCTCAGCAGG
 A C G T G T A C C G T A A C T G A C G T A G T C A G T C C G T A A C T G A T G C A T C G A T C G A C T G
A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

SREBF2/MA0596.1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TCAGTCCAGCGGG
ATCACCCCAT----
 A C G T A C G T G T A C C G T A A C T G A C G T A G T C A G T C C G T A A C T G A T G C A T C G A T C G A C T G
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T A C G T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TCAGTCCAGCGGG
RCATTCCWGG---
 A C G T G T A C C G T A A C T G A C G T A G T C A G T C C G T A A C T G A T G C A T C G A T C G A C T G
C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TCAGTCCAGCGGG-----
---DCHCAGCAGGRGGCC
 A C G T G T A C C G T A A C T G A C G T A G T C A G T C C G T A A C T G A T G C A T C G A T C G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:6
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TCAGTCCAGCGGG--
NGTGTTCAVTSAAGCGKAAA
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G A C G T A G T C A G T C C G T A A C T G A T G C A T C G A T C G A C T G A C G T A C G T
A G C T T A C G C G A T T C A G A G C T A C G T G A T C C T G A T A G C A G C T A T G C C T G A C G T A A T C G A G T C C T A G A C T G C T G A G T C A T C G A

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TCAGTCCAGCGGG
------CAGCC--
 A C G T G T A C C G T A A C T G A C G T A G T C A G T C C G T A A C T G A T G C A T C G A T C G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

PAX5/MA0014.2/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TCAGTCCAGCGGG--
GAGGGCAGCCAAGCGTGAC
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G A C G T A G T C A G T C C G T A A C T G A T G C A T C G A T C G A C T G A C G T A C G T
T C A G C G T A T C A G C T A G A C T G G A T C C T G A T A C G A G T C T A G C T C G A C T G A A T C G A G T C C T A G C A G T C T A G C T G A G T A C

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TCAGTCCAGCGGG
GCATTCCAGN---
 A C G T G T A C C G T A A C T G A C G T A G T C A G T C C G T A A C T G A T G C A T C G A T C G A C T G
C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TCAGTCCAGCGGG---
GCAGCCAAGCGTGACN
 A C G T G T A C C G T A A C T G A C G T A G T C A G T C C G T A A C T G A T G C A T C G A T C G A C T G A C G T A C G T A C G T
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C