Information for 10-CAGAGTAAGG (Motif 35)

A G T C C G T A A C T G C G T A A C T G A C G T C G T A C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C G T C G T A A G T C A C G T A G T C A C G T A C T G
p-value:1e-4
log p-value:-1.023e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.0 +/- 29.4bp
Average Position of motif in Background36.2 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAGAGTAAGG-----
-GGAGAAAGGTGCGA
 A G T C C G T A A C T G C G T A A C T G A C G T C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAGAGTAAGG-
-AGAGGAAGTG
 A G T C C G T A A C T G C G T A A C T G A C G T C G T A C G T A A C T G A C T G A C G T
A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

SPIB/MA0081.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAGAGTAAGG
-AGAGGAA--
 A G T C C G T A A C T G C G T A A C T G A C G T C G T A C G T A A C T G A C T G
A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CAGAGTAAGG---
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G A C G T C G T A C G T A A C T G A C T G A C G T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CAGAGTAAGG
GAAAGTGAAAGT
 A C G T A C G T A G T C C G T A A C T G C G T A A C T G A C G T C G T A C G T A A C T G A C T G
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CAGAGTAAGG-
GCTGASTCAGCA
 A C G T A G T C C G T A A C T G C G T A A C T G A C G T C G T A C G T A A C T G A C T G A C G T
T C A G T A G C G A C T C A T G C T G A A T C G G C A T G T A C C G T A A C T G T A G C T G C A

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAGAGTAAGG--
-CAGGTAAGTAT
 A G T C C G T A A C T G C G T A A C T G A C G T C G T A C G T A A C T G A C T G A C G T A C G T
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CAGAGTAAGG
AACAGGAAGT
 A G T C C G T A A C T G C G T A A C T G A C G T C G T A C G T A A C T G A C T G
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CAGAGTAAGG--
NTGCTGAGTCATCCN
 A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G A C G T C G T A C G T A A C T G A C T G A C G T A C G T
T A C G G A C T A C T G A T G C G A C T A C T G G T C A A T C G C G A T G T A C C G T A A G C T A T G C T A G C A G C T

FOS::JUN/MA0099.2/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CAGAGTAAGG
-TGAGTCA--
 A G T C C G T A A C T G C G T A A C T G A C G T C G T A C G T A A C T G A C T G
A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T