Information for 12-TCTTGCCYRGGYK (Motif 27)

A C G T G T A C A C G T A C G T A C T G A G T C A G T C A G C T C T G A A C T G A C T G A G C T A C G T
Reverse Opposite:
G T C A C T G A A G T C A G T C A G C T C T G A A C T G A C T G A G T C C G T A C G T A A C T G C G T A
p-value:1e-7
log p-value:-1.716e+01
Information Content per bp:1.878
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 16.6bp
Average Position of motif in Background48.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TCTTGCCYRGGYK
NNACTTGCCTT----
 A C G T A C G T A C G T G T A C A C G T A C G T A C T G A G T C A G T C A G C T C T G A A C T G A C T G A G C T A C G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TCTTGCCYRGGYK-
ACATGCCCGGGCAT
 A C G T G T A C A C G T A C G T A C T G A G T C A G T C A G C T C T G A A C T G A C T G A G C T A C G T A C G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TCTTGCCYRGGYK
---TGCCCAGNHW
 A C G T G T A C A C G T A C G T A C T G A G T C A G T C A G C T C T G A A C T G A C T G A G C T A C G T
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TCTTGCCYRGGYK
GGGGCTYGKCTGGGA-
 A C G T A C G T A C G T A C G T G T A C A C G T A C G T A C T G A G T C A G T C A G C T C T G A A C T G A C T G A G C T A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCTTGCCYRGGYK
--TTGCCAAG---
 A C G T G T A C A C G T A C G T A C T G A G T C A G T C A G C T C T G A A C T G A C T G A G C T A C G T
A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TCTTGCCYRGGYK--
-GTTGCCATGGNAAC
 A C G T G T A C A C G T A C G T A C T G A G T C A G T C A G C T C T G A A C T G A C T G A G C T A C G T A C G T A C G T
A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

EGR2/MA0472.2/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TCTTGCCYRGGYK-
---TGCGTGGGCGT
 A C G T G T A C A C G T A C G T A C T G A G T C A G T C A G C T C T G A A C T G A C T G A G C T A C G T A C G T
A C G T A C G T A C G T G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCTTGCCYRGGYK
--ATGCCCACC--
 A C G T G T A C A C G T A C G T A C T G A G T C A G T C A G C T C T G A A C T G A C T G A G C T A C G T
A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TCTTGCCYRGGYK
CTGTTGCTAGGS--
 A C G T A C G T G T A C A C G T A C G T A C T G A G T C A G T C A G C T C T G A A C T G A C T G A G C T A C G T
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T A C G T

EGR3/MA0732.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TCTTGCCYRGGYK---
-ANTGCGTGGGCGTNN
 A C G T G T A C A C G T A C G T A C T G A G T C A G T C A G C T C T G A A C T G A C T G A G C T A C G T A C G T A C G T A C G T
A C G T C G T A C T A G G A C T C T A G A G T C T A C G A C G T T C A G C T A G A T C G G A T C C T A G C A G T C T G A C T A G