Information for 4-TCATAAATGT (Motif 20)

A C G T A G T C C G T A G C A T C G T A C G T A G T C A C G A T A C T G A G C T
Reverse Opposite:
C T G A G T A C C G T A A C G T A C G T A C G T C G T A C G A T T C A G C G T A
p-value:1e-8
log p-value:-1.977e+01
Information Content per bp:1.843
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.01%
Number of Background Sequences with motif128.9
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets49.1 +/- 23.9bp
Average Position of motif in Background53.4 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----TCATAAATGT
NNTNTCATGAATGT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A G C A T C G T A C G T A G T C A C G A T A C T G A G C T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:2
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TCATAAATGT
NGYCATAAAWCH
 A C G T A C G T A C G T A G T C C G T A G C A T C G T A C G T A G T C A C G A T A C T G A G C T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

HOXC10/MA0905.1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TCATAAATGT
GTCGTAAAAT-
 A C G T A C G T A G T C C G T A G C A T C G T A C G T A G T C A C G A T A C T G A G C T
T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TCATAAATGT
GCAATAAAA--
 A C G T A C G T A G T C C G T A G C A T C G T A C G T A G T C A C G A T A C T G A G C T
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:5
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----TCATAAATGT-
AAAGCTCGTAAAATTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G C A T C G T A C G T A G T C A C G A T A C T G A G C T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TCATAAATGT
GTCATAAAAN-
 A C G T A C G T A G T C C G T A G C A T C G T A C G T A G T C A C G A T A C T G A G C T
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TCATAAATGT
GGTCGTAAAATT
 A C G T A C G T A C G T A G T C C G T A G C A T C G T A C G T A G T C A C G A T A C T G A G C T
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T

PH0012.1_Cdx1/Jaspar

Match Rank:8
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----TCATAAATGT-
TAAGGTAATAAAATTA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G C A T C G T A C G T A G T C A C G A T A C T G A G C T A C G T
C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A

PH0013.1_Cdx2/Jaspar

Match Rank:9
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----TCATAAATGT-
AAAGGTAATAAAATTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G C A T C G T A C G T A G T C A C G A T A C T G A G C T A C G T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TCATAAATGT
NCYAATAAAA--
 A C G T A C G T A C G T A G T C C G T A G C A T C G T A C G T A G T C A C G A T A C T G A G C T
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T