Information for 4-YAGGAKGCCTTTK (Motif 12)

A G T C C G T A A C T G A C T G C G T A C A G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
Reverse Opposite:
G T C A C G T A C G T A C G T A A C T G A C T G A G T C G T A C A C G T A G T C A G T C A C G T C T A G
p-value:1e-9
log p-value:-2.227e+01
Information Content per bp:1.900
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.6 +/- 27.4bp
Average Position of motif in Background36.5 +/- 12.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PROX1/MA0794.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:YAGGAKGCCTTTK
CAAGACGCCTTA-
 A G T C C G T A A C T G A C T G C G T A C A G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:YAGGAKGCCTTTK
--CNAGGCCT---
 A G T C C G T A A C T G A C T G C G T A C A G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:YAGGAKGCCTTTK--
AGGGAAGTCATTTCT
 A G T C C G T A A C T G A C T G C G T A C A G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:YAGGAKGCCTTTK
--CTAGGCCT---
 A G T C C G T A A C T G A C T G C G T A C A G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--YAGGAKGCCTTTK
ANCAGGATGT-----
 A C G T A C G T A G T C C G T A A C T G A C T G C G T A C A G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----YAGGAKGCCTTTK
CTACTAGGATGTNNTN-
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G C G T A C A G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--YAGGAKGCCTTTK
AACAGGAAGT-----
 A C G T A C G T A G T C C G T A A C T G A C T G C G T A C A G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:YAGGAKGCCTTTK
-AGGAAACAGCTG
 A G T C C G T A A C T G A C T G C G T A C A G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.55
Offset:7
Orientation:forward strand
Alignment:YAGGAKGCCTTTK--
-------CCTTTGTT
 A G T C C G T A A C T G A C T G C G T A C A G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.55
Offset:7
Orientation:forward strand
Alignment:YAGGAKGCCTTTK--
-------CCWTTGTY
 A G T C C G T A A C T G A C T G C G T A C A G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T