Information for 5-GAHCCGTCTHGAGCGG (Motif 8)

A T C G G T C A G A C T A G T C A G T C A T C G A C G T A G T C A C G T G C T A A T C G C T G A A T C G A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G A T G C G A C T A T G C C A G T G T C A A C T G G T C A A T G C A C T G A C T G C T G A A C G T A T G C
p-value:1e-11
log p-value:-2.661e+01
Information Content per bp:1.804
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.4 +/- 22.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLIS1/MA0735.1/Jaspar

Match Rank:1
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GAHCCGTCTHGAGCGG---
---GCTTCGTGGGGGGTCT
 A T C G G T C A G A C T A G T C A G T C A T C G A C G T A G T C A C G T G C T A A T C G C T G A A T C G A G T C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T A C G G T A C C G A T G C A T G T A C A C T G G A C T A C T G C T A G A T C G A T C G C A T G A T C G G C A T T G A C C A G T

GLIS3/MA0737.1/Jaspar

Match Rank:2
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GAHCCGTCTHGAGCGG--
----CTTCGTGGGGGGTC
 A T C G G T C A G A C T A G T C A G T C A T C G A C G T A G T C A C G T G C T A A T C G C T G A A T C G A G T C A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T A G C C A G T G C A T G A T C T C A G G A C T C T A G A C T G C T A G C T A G A C T G T A C G A G C T T G A C

GLIS2/MA0736.1/Jaspar

Match Rank:3
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GAHCCGTCTHGAGCGG--
----CTTCGCGGGGGGTC
 A T C G G T C A G A C T A G T C A G T C A T C G A C G T A G T C A C G T G C T A A T C G C T G A A T C G A G T C A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C

CENPB/MA0637.1/Jaspar

Match Rank:4
Score:0.49
Offset:2
Orientation:forward strand
Alignment:GAHCCGTCTHGAGCGG-
--CCCGCATACAACGAA
 A T C G G T C A G A C T A G T C A G T C A T C G A C G T A G T C A C G T G C T A A T C G C T G A A T C G A G T C A C T G A C T G A C G T
A C G T A C G T G A T C G A T C G A T C A C T G A G T C C G T A G A C T T G C A T A G C G C T A T C G A G T A C T C A G G C T A G T C A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.48
Offset:-5
Orientation:reverse strand
Alignment:-----GAHCCGTCTHGAGCGG
NNNNTGACCCGGCGCG-----
 A C G T A C G T A C G T A C G T A C G T A T C G G T C A G A C T A G T C A G T C A T C G A C G T A G T C A C G T G C T A A T C G C T G A A T C G A G T C A C T G A C T G
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.48
Offset:3
Orientation:forward strand
Alignment:GAHCCGTCTHGAGCGG
---CTGTCTGG-----
 A T C G G T C A G A C T A G T C A G T C A T C G A C G T A G T C A C G T G C T A A T C G C T G A A T C G A G T C A C T G A C T G
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:7
Score:0.47
Offset:8
Orientation:forward strand
Alignment:GAHCCGTCTHGAGCGG----
--------BTKGGCGGGAAA
 A T C G G T C A G A C T A G T C A G T C A T C G A C G T A G T C A C G T G C T A A T C G C T G A A T C G A G T C A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

PB0118.1_Esrra_2/Jaspar

Match Rank:8
Score:0.47
Offset:-6
Orientation:reverse strand
Alignment:------GAHCCGTCTHGAGCGG
NNNNTTGACCCCTNNNN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T C A G A C T A G T C A G T C A T C G A C G T A G T C A C G T G C T A A T C G C T G A A T C G A G T C A C T G A C T G
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C A C G T A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.47
Offset:10
Orientation:forward strand
Alignment:GAHCCGTCTHGAGCGG-----
----------GGGCGGGAAGG
 A T C G G T C A G A C T A G T C A G T C A T C G A C G T A G T C A C G T G C T A A T C G C T G A A T C G A G T C A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.46
Offset:-5
Orientation:reverse strand
Alignment:-----GAHCCGTCTHGAGCGG
NNCNTGACCCCGCTCT-----
 A C G T A C G T A C G T A C G T A C G T A T C G G T C A G A C T A G T C A G T C A T C G A C G T A G T C A C G T G C T A A T C G C T G A A T C G A G T C A C T G A C T G
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T A C G T A C G T A C G T A C G T A C G T