Information for 3-AGACTTCACAAATGGA (Motif 6)

C G T A A C T G C G T A G T A C A G C T A G C T A G T C C G T A A T G C C G T A C T G A C G T A A C G T A C T G A T C G C G T A
Reverse Opposite:
A C G T A T G C A G T C G T C A A C G T A G C T G A C T A T C G A C G T A C T G C T G A C T G A A C T G A C G T A G T C G C A T
p-value:1e-11
log p-value:-2.661e+01
Information Content per bp:1.900
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.4 +/- 22.6bp
Average Position of motif in Background57.5 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Twist2/MA0633.1/Jaspar

Match Rank:1
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:AGACTTCACAAATGGA
------NACATATGGN
 C G T A A C T G C G T A G T A C A G C T A G C T A G T C C G T A A T G C C G T A C T G A C G T A A C G T A C T G A T C G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

Bhlha15/MA0607.1/Jaspar

Match Rank:2
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:AGACTTCACAAATGGA
-------ACATATGG-
 C G T A A C T G C G T A G T A C A G C T A G C T A G T C C G T A A T G C C G T A C T G A C G T A A C G T A C T G A T C G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGACTTCACAAATGGA---
--NNTNNACAATGGGANNN
 C G T A A C T G C G T A G T A C A G C T A G C T A G T C C G T A A T G C C G T A C T G A C G T A A C G T A C T G A T C G C G T A A C G T A C G T A C G T
A C G T A C G T C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

HOXA5/MA0158.1/Jaspar

Match Rank:4
Score:0.53
Offset:6
Orientation:forward strand
Alignment:AGACTTCACAAATGGA
------CACTAATT--
 C G T A A C T G C G T A G T A C A G C T A G C T A G T C C G T A A T G C C G T A C T G A C G T A A C G T A C T G A T C G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGACTTCACAAATGGA
TCCAATCCACA------
 A C G T C G T A A C T G C G T A G T A C A G C T A G C T A G T C C G T A A T G C C G T A C T G A C G T A A C G T A C T G A T C G C G T A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:AGACTTCACAAATGGA
------AACAAAGG--
 C G T A A C T G C G T A G T A C A G C T A G C T A G T C C G T A A T G C C G T A C T G A C G T A A C G T A C T G A T C G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:7
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:AGACTTCACAAATGGA
------AACAGATGGT
 C G T A A C T G C G T A G T A C A G C T A G C T A G T C C G T A A T G C C G T A C T G A C G T A A C G T A C T G A T C G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGACTTCACAAATGGA
SSAATCCACANN----
 C G T A A C T G C G T A G T A C A G C T A G C T A G T C C G T A A T G C C G T A C T G A C G T A A C G T A C T G A T C G C G T A
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:9
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:AGACTTCACAAATGGA
------AACAKATGGY
 C G T A A C T G C G T A G T A C A G C T A G C T A G T C C G T A A T G C C G T A C T G A C G T A A C G T A C T G A T C G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:AGACTTCACAAATGGA
------RACAAWGG--
 C G T A A C T G C G T A G T A C A G C T A G C T A G T C C G T A A T G C C G T A C T G A C G T A A C G T A C T G A T C G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T