Information for 2-CGGACCTTAC (Motif 15)

A T G C C A T G A T C G G T C A T G A C A G T C A G C T A G C T G C T A T G A C
Reverse Opposite:
A C T G C G A T T C G A C T G A T C A G A C T G A C G T A T G C G T A C T A C G
p-value:1e-9
log p-value:-2.188e+01
Information Content per bp:1.670
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif6.60%
Number of Background Sequences with motif983.5
Percentage of Background Sequences with motif2.08%
Average Position of motif in Targets49.1 +/- 27.7bp
Average Position of motif in Background50.8 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CGGACCTTAC---
NNGCACCTTTCTCC
 A C G T A T G C C A T G A T C G G T C A T G A C A G T C A G C T A G C T G C T A T G A C A C G T A C G T A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

HINFP/MA0131.2/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CGGACCTTAC
NCGCGGACGTTG-
 A C G T A C G T A C G T A T G C C A T G A T C G G T C A T G A C A G T C A G C T A G C T G C T A T G A C
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGGACCTTAC
-TGACCTYA-
 A T G C C A T G A T C G G T C A T G A C A G T C A G C T A G C T G C T A T G A C
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGGACCTTAC
-TGACCT---
 A T G C C A T G A T C G G T C A T G A C A G T C A G C T A G C T G C T A T G A C
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CGGACCTTAC
GTGACCTT--
 A T G C C A T G A T C G G T C A T G A C A G T C A G C T A G C T G C T A T G A C
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CGGACCTTAC---
-TGACCTTTNCNT
 A T G C C A T G A T C G G T C A T G A C A G T C A G C T A G C T G C T A T G A C A C G T A C G T A C G T
A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGGACCTTAC
NTGACCTTGA
 A T G C C A T G A T C G G T C A T G A C A G T C A G C T A G C T G C T A T G A C
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CGGACCTTAC---
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A T G C C A T G A T C G G T C A T G A C A G T C A G C T A G C T G C T A T G A C A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CGGACCTTAC---
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T A T G C C A T G A T C G G T C A T G A C A G T C A G C T A G C T G C T A T G A C A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGGACCTTAC
CTGACCTTTG
 A T G C C A T G A T C G G T C A T G A C A G T C A G C T A G C T G C T A T G A C
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G