| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
| 1 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-3 | -8.042e+00 | 0.1171 | 26.0 | 3.11% | 708.1 | 1.45% | motif file (matrix) |
svg |
| 2 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -6.207e+00 | 0.3667 | 180.0 | 21.56% | 8585.7 | 17.62% | motif file (matrix) |
svg |
| 3 |
| Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer | 1e-2 | -5.635e+00 | 0.4332 | 99.0 | 11.86% | 4401.9 | 9.03% | motif file (matrix) |
svg |
| 4 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-2 | -5.507e+00 | 0.4332 | 71.0 | 8.50% | 2994.7 | 6.14% | motif file (matrix) |
svg |
| 5 |
| IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer | 1e-2 | -5.175e+00 | 0.4332 | 9.0 | 1.08% | 188.0 | 0.39% | motif file (matrix) |
svg |
| 6 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-2 | -4.742e+00 | 0.5292 | 15.0 | 1.80% | 431.7 | 0.89% | motif file (matrix) |
svg |
| 7 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-2 | -4.653e+00 | 0.5292 | 31.0 | 3.71% | 1144.0 | 2.35% | motif file (matrix) |
svg |
