Information for 4-GAGGCCTCCGMGG (Motif 12)

A T C G T G C A A C T G A C T G A T G C A G T C C A G T A T G C G A T C A T C G G T A C A T C G A C T G
Reverse Opposite:
G T A C T A G C C A T G A T G C C T A G A T C G G C T A A C T G A T C G G T A C A G T C A C G T A T G C
p-value:1e-9
log p-value:-2.110e+01
Information Content per bp:1.769
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.71%
Number of Background Sequences with motif87.9
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets40.3 +/- 24.3bp
Average Position of motif in Background45.3 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GAGGCCTCCGMGG
CNAGGCCT------
 A C G T A T C G T G C A A C T G A C T G A T G C A G T C C A G T A T G C G A T C A T C G G T A C A T C G A C T G
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GAGGCCTCCGMGG
CTAGGCCT------
 A C G T A T C G T G C A A C T G A C T G A T G C A G T C C A G T A T G C G A T C A T C G G T A C A T C G A C T G
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GAGGCCTCCGMGG-
CAGGCCNNGGCCNN
 A T C G T G C A A C T G A C T G A T G C A G T C C A G T A T G C G A T C A T C G G T A C A T C G A C T G A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAGGCCTCCGMGG-
NNGCNCTGCGCGGC
 A T C G T G C A A C T G A C T G A T G C A G T C C A G T A T G C G A T C A T C G G T A C A T C G A C T G A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GAGGCCTCCGMGG
NNNNTGAGCACTGTNNG-
 A C G T A C G T A C G T A C G T A C G T A T C G T G C A A C T G A C T G A T G C A G T C C A G T A T G C G A T C A T C G G T A C A T C G A C T G
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAGGCCTCCGMGG-
GGGGCCCAAGGGGG
 A T C G T G C A A C T G A C T G A T G C A G T C C A G T A T G C G A T C A T C G G T A C A T C G A C T G A C G T
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GAGGCCTCCGMGG------
NGAGGTCANNGAGTTCANNN
 A C G T A T C G T G C A A C T G A C T G A T G C A G T C C A G T A T G C G A T C A T C G G T A C A T C G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GAGGCCTCCGMGG
----GCTCCG---
 A T C G T G C A A C T G A C T G A T G C A G T C C A G T A T G C G A T C A T C G G T A C A T C G A C T G
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GAGGCCTCCGMGG
----GCTGTG---
 A T C G T G C A A C T G A C T G A T G C A G T C C A G T A T G C G A T C A T C G G T A C A T C G A C T G
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GAGGCCTCCGMGG
NRRGGGTCTT-----
 A C G T A C G T A T C G T G C A A C T G A C T G A T G C A G T C C A G T A T G C G A T C A T C G G T A C A T C G A C T G
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T