Information for 4-CCAGGATCCTCAT (Motif 4)

G A T C A T G C C G T A A C T G A C T G C G T A A C G T A G T C A G T C A C G T A G T C C G T A A C G T
Reverse Opposite:
C G T A C G A T A C T G C G T A A C T G A C T G C G T A C G A T A G T C A G T C A C G T A T C G C T A G
p-value:1e-10
log p-value:-2.509e+01
Information Content per bp:1.932
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.6 +/- 29.5bp
Average Position of motif in Background63.8 +/- 8.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCAGGATCCTCAT
ANCAGGATGT----
 A C G T G A T C A T G C C G T A A C T G A C T G C G T A A C G T A G T C A G T C A C G T A G T C C G T A A C G T
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:2
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCAGGATCCTCAT
ATTTCCCAGVAKSCY---
 A C G T A C G T A C G T A C G T A C G T G A T C A T G C C G T A A C T G A C T G C G T A A C G T A G T C A G T C A C G T A G T C C G T A A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCAGGATCCTCAT
TGCCTGCGYCMCCTT
 A C G T A C G T G A T C A T G C C G T A A C T G A C T G C G T A A C G T A G T C A G T C A C G T A G T C C G T A A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:4
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CCAGGATCCTCAT-------
---GCAACCTCATTATNNNN
 G A T C A T G C C G T A A C T G A C T G C G T A A C G T A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

MZF1/MA0056.1/Jaspar

Match Rank:5
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:CCAGGATCCTCAT
------TCCCCA-
 G A T C A T G C C G T A A C T G A C T G C G T A A C G T A G T C A G T C A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:6
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CCAGGATCCTCAT
CTACTAGGATGTNNTN
 A C G T A C G T A C G T G A T C A T G C C G T A A C T G A C T G C G T A A C G T A G T C A G T C A C G T A G T C C G T A A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

SPIB/MA0081.1/Jaspar

Match Rank:7
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CCAGGATCCTCAT
-----TTCCTCT-
 G A T C A T G C C G T A A C T G A C T G C G T A A C G T A G T C A G T C A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:8
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----CCAGGATCCTCAT
AANNATCCGGATGTNN--
 A C G T A C G T A C G T A C G T A C G T G A T C A T G C C G T A A C T G A C T G C G T A A C G T A G T C A G T C A C G T A G T C C G T A A C G T
T C G A C T G A C T G A C G T A C G T A G A C T T A G C T G A C A C T G A C T G C G T A G C A T T C A G G A C T C T G A A G T C A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CCAGGATCCTCAT
-TCCAATCCACA-
 G A T C A T G C C G T A A C T G A C T G C G T A A C G T A G T C A G T C A C G T A G T C C G T A A C G T
A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:10
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CCAGGATCCTCAT-------
---NNNACCTCATTATCNTN
 G A T C A T G C C G T A A C T G A C T G C G T A A C G T A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C