p-value: | 1e-7 |
log p-value: | -1.710e+01 |
Information Content per bp: | 1.748 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.59% |
Number of Background Sequences with motif | 5.7 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 55.4 +/- 22.2bp |
Average Position of motif in Background | 42.9 +/- 23.8bp |
Strand Bias (log2 ratio + to - strand density) | -10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer
Match Rank: | 1 |
Score: | 0.81 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TGGTYGCYWGGMRACS -KGTTGCTAGGMAACA |
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PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 2 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGGTYGCYWGGMRACS NCCGTTGCTANGNGN-- |
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Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 3 |
Score: | 0.66 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGGTYGCYWGGMRACS CTGTTGCTAGGS---- |
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PB0054.1_Rfx3_1/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TGGTYGCYWGGMRACS-- NTNNNNNGTTGCTANGGNNCANA |
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PB0055.1_Rfx4_1/Jaspar
Match Rank: | 5 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGGTYGCYWGGMRACS NNCGTTGCTATGGNN-- |
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Rfx1/MA0509.1/Jaspar
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TGGTYGCYWGGMRACS -GTTGCCATGGCAAC- |
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PB0160.1_Rfxdc2_2/Jaspar
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TGGTYGCYWGGMRACS---- ---CTACTTGGATACGGAAT |
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Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer
Match Rank: | 8 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGGTYGCYWGGMRACS NNNCTTTCCAGGAAA-- |
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PB0158.1_Rfx3_2/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGGTYGCYWGGMRACS------ ACTGACCCTTGGTTACCACAAAG |
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PB0159.1_Rfx4_2/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TGGTYGCYWGGMRACS-- ---TACCCTAGTTACCGA |
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