Information for 6-CGGGTCCGTA (Motif 13)

A T G C A C T G A C T G A C T G C G A T A G T C A G T C A C T G A G C T C T G A
Reverse Opposite:
A G C T T C G A A G T C A C T G A C T G G C T A A G T C G T A C A G T C T A C G
p-value:1e-8
log p-value:-2.010e+01
Information Content per bp:1.863
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif27.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets49.1 +/- 25.0bp
Average Position of motif in Background50.5 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CGGGTCCGTA---
-AGGTCTCTAACC
 A T G C A C T G A C T G A C T G C G A T A G T C A G T C A C T G A G C T C T G A A C G T A C G T A C G T
A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

Gmeb1/MA0615.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGGGTCCGTA------
GAGTGTACGTAAGATGG
 A C G T A T G C A C T G A C T G A C T G C G A T A G T C A G T C A C T G A G C T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

PB0027.1_Gmeb1_1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGGGTCCGTA------
GAGTGTACGTAAGATGG
 A C G T A T G C A C T G A C T G A C T G C G A T A G T C A G T C A C T G A G C T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CGGGTCCGTA-
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G A C T G C G A T A G T C A G T C A C T G A G C T C T G A A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

HINFP/MA0131.2/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CGGGTCCGTA-
CAACGTCCGCGG
 A C G T A T G C A C T G A C T G A C T G C G A T A G T C A G T C A C T G A G C T C T G A A C G T
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CGGGTCCGTA
NRRGGGTCTT--
 A C G T A C G T A T G C A C T G A C T G A C T G C G A T A G T C A G T C A C T G A G C T C T G A
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CGGGTCCGTA
GGGCGGGACC---
 A C G T A C G T A C G T A T G C A C T G A C T G A C T G C G A T A G T C A G T C A C T G A G C T C T G A
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:8
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------CGGGTCCGTA
NTNTGGGGGGTCNNNA
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G A C T G C G A T A G T C A G T C A C T G A G C T C T G A
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CGGGTCCGTA
--GCTCCG--
 A T G C A C T G A C T G A C T G C G A T A G T C A G T C A C T G A G C T C T G A
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CGGGTCCGTA
-AGGTCA---
 A T G C A C T G A C T G A C T G C G A T A G T C A G T C A C T G A G C T C T G A
A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T