Information for 3-TCCTCGGAAC (Motif 11)

A C G T A G T C A T G C A G C T T G A C T A C G A T C G T C G A T C G A A G T C
Reverse Opposite:
A C T G A G C T A G C T A T G C A T G C A C T G T C G A A T C G A C T G G T C A
p-value:1e-8
log p-value:-2.025e+01
Information Content per bp:1.711
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif6.29%
Number of Background Sequences with motif1207.7
Percentage of Background Sequences with motif2.48%
Average Position of motif in Targets52.2 +/- 23.5bp
Average Position of motif in Background50.8 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TCCTCGGAAC
TTCCKNAGAA-
 A C G T A C G T A G T C A T G C A G C T T G A C T A C G A T C G T C G A T C G A A G T C
G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TCCTCGGAAC-
TGTTKCCTAGCAACM
 A C G T A C G T A C G T A C G T A C G T A G T C A T G C A G C T T G A C T A C G A T C G T C G A T C G A A G T C A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TCCTCGGAAC
ANTTCTNNAGAA-
 A C G T A C G T A C G T A C G T A G T C A T G C A G C T T G A C T A C G A T C G T C G A T C G A A G T C
C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A A C G T

Stat6/MA0520.1/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TCCTCGGAAC-
CATTTCCTGAGAAAT
 A C G T A C G T A C G T A C G T A C G T A G T C A T G C A G C T T G A C T A C G A T C G T C G A T C G A A G T C A C G T
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TCCTCGGAAC--
SCCTAGCAACAG
 A C G T A G T C A T G C A G C T T G A C T A C G A T C G T C G A T C G A A G T C A C G T A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

MZF1/MA0056.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCCTCGGAAC
TCCCCA----
 A C G T A G T C A T G C A G C T T G A C T A C G A T C G T C G A T C G A A G T C
A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TCCTCGGAAC
NNAYTTCCTGHN---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T G C A G C T T G A C T A C G A T C G T C G A T C G A A G T C
A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCCTCGGAAC-
TTCTTGGAAAN
 A C G T A G T C A T G C A G C T T G A C T A C G A T C G T C G A T C G A A G T C A C G T
A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

PB0055.1_Rfx4_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCCTCGGAAC---
TACCATAGCAACGGT
 A C G T A C G T A C G T A G T C A T G C A G C T T G A C T A C G A T C G T C G A T C G A A G T C A C G T A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCCTCGGAAC---
CCGCATAGCAACGGA
 A C G T A C G T A C G T A G T C A T G C A G C T T G A C T A C G A T C G T C G A T C G A A G T C A C G T A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A