Information for 6-TGACCACATTTYTGCA (Motif 9)

C G A T C T A G T C G A G T A C A G T C C G T A A G T C C G T A C A G T A C G T A C G T A G T C C G A T A C T G G T A C G T C A
Reverse Opposite:
A C G T A C T G A G T C C G T A T C A G G T C A C G T A G C T A C G A T A C T G C G A T C T A G A C T G A C G T A G T C C G T A
p-value:1e-10
log p-value:-2.522e+01
Information Content per bp:1.744
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.4 +/- 22.8bp
Average Position of motif in Background68.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:TGACCACATTTYTGCA----
-----ANATTTTTGCAANTN
 C G A T C T A G T C G A G T A C A G T C C G T A A G T C C G T A C A G T A C G T A C G T A G T C C G A T A C T G G T A C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGACCACATTTYTGCA
NWAACCACADNN-----
 A C G T C G A T C T A G T C G A G T A C A G T C C G T A A G T C C G T A C A G T A C G T A C G T A G T C C G A T A C T G G T A C G T C A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGACCACATTTYTGCA
NAAACCACAG-------
 A C G T C G A T C T A G T C G A G T A C A G T C C G T A A G T C C G T A C A G T A C G T A C G T A G T C C G A T A C T G G T A C G T C A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGACCACATTTYTGCA
AAACCACAGC------
 C G A T C T A G T C G A G T A C A G T C C G T A A G T C C G T A C A G T A C G T A C G T A G T C C G A T A C T G G T A C G T C A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGACCACATTTYTGCA
AAACCACANN------
 C G A T C T A G T C G A G T A C A G T C C G T A A G T C C G T A C A G T A C G T A C G T A G T C C G A T A C T G G T A C G T C A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGACCACATTTYTGCA
AAACCACAGAN-----
 C G A T C T A G T C G A G T A C A G T C C G T A A G T C C G T A C A G T A C G T A C G T A G T C C G A T A C T G G T A C G T C A
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T

HOXA5/MA0158.1/Jaspar

Match Rank:7
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TGACCACATTTYTGCA
------AATTAGTG--
 C G A T C T A G T C G A G T A C A G T C C G T A A G T C C G T A C A G T A C G T A C G T A G T C C G A T A C T G G T A C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGACCACATTTYTGCA
NNCNNAACAATTNT---
 A C G T C G A T C T A G T C G A G T A C A G T C C G T A A G T C C G T A C A G T A C G T A C G T A G T C C G A T A C T G G T A C G T C A
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T A C G T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGACCACATTTYTGCA
NATGACATCATCNNN---
 A C G T A C G T C G A T C T A G T C G A G T A C A G T C C G T A A G T C C G T A C A G T A C G T A C G T A G T C C G A T A C T G G T A C G T C A
A C T G T C G A A C G T A C T G C T G A A G T C T C G A A C G T G T A C C G T A A G C T A G T C G C A T G A C T G C A T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TGACCACATTTYTGCA
AAACCGCAA-------
 C G A T C T A G T C G A G T A C A G T C C G T A A G T C C G T A C A G T A C G T A C G T A G T C C G A T A C T G G T A C G T C A
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T