Information for 9-CCYGSACACTSGCRMM (Motif 25)

A T G C A T G C A G T C A C T G A T G C G T C A G T A C C G T A A G T C A C G T A T G C A C T G A G T C T C A G G T A C G T C A
Reverse Opposite:
C A G T A C T G A G T C A C T G A G T C A T C G C G T A A C T G A C G T A C T G A C G T A T C G A G T C C T A G A T C G A T C G
p-value:1e-6
log p-value:-1.594e+01
Information Content per bp:1.840
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.8 +/- 19.7bp
Average Position of motif in Background56.1 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCYGSACACTSGCRMM
AGCGGCACACACGCAA-
 A C G T A T G C A T G C A G T C A C T G A T G C G T C A G T A C C G T A A G T C A C G T A T G C A C T G A G T C T C A G G T A C G T C A
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCYGSACACTSGCRMM--
--CAATCACTGGCAGAAT
 A T G C A T G C A G T C A C T G A T G C G T C A G T A C C G T A A G T C A C G T A T G C A C T G A G T C T C A G G T A C G T C A A C G T A C G T
A C G T A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CCYGSACACTSGCRMM
---GAACAATGGN---
 A T G C A T G C A G T C A C T G A T G C G T C A G T A C C G T A A G T C A C G T A T G C A C T G A G T C T C A G G T A C G T C A
A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:4
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CCYGSACACTSGCRMM
TACCCGCATN--------
 A C G T A C G T A T G C A T G C A G T C A C T G A T G C G T C A G T A C C G T A A G T C A C G T A T G C A C T G A G T C T C A G G T A C G T C A
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CCYGSACACTSGCRMM
CCAGGAACAG-------
 A C G T A T G C A T G C A G T C A C T G A T G C G T C A G T A C C G T A A G T C A C G T A T G C A C T G A G T C T C A G G T A C G T C A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CCYGSACACTSGCRMM-
NNTNNACAATGGGANNN
 A T G C A T G C A G T C A C T G A T G C G T C A G T A C C G T A A G T C A C G T A T G C A C T G A G T C T C A G G T A C G T C A A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CCYGSACACTSGCRMM
---RAACAATGGN---
 A T G C A T G C A G T C A C T G A T G C G T C A G T A C C G T A A G T C A C G T A T G C A C T G A G T C T C A G G T A C G T C A
A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CCYGSACACTSGCRMM-
-ATTTACAGTAGCAAAA
 A T G C A T G C A G T C A C T G A T G C G T C A G T A C C G T A A G T C A C G T A T G C A C T G A G T C T C A G G T A C G T C A A C G T
A C G T G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CCYGSACACTSGCRMM
---GGACACACCCCC-
 A T G C A T G C A G T C A C T G A T G C G T C A G T A C C G T A A G T C A C G T A T G C A C T G A G T C T C A G G T A C G T C A
A C G T A C G T A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CCYGSACACTSGCRMM
-----CCACTTGAA--
 A T G C A T G C A G T C A C T G A T G C G T C A G T A C C G T A A G T C A C G T A T G C A C T G A G T C T C A G G T A C G T C A
A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T