Information for 6-CYYRYYCACAAAM (Motif 12)

A G T C A G T C A G C T C T A G A G T C A G C T A G T C C G T A A T G C C G T A C G T A C G T A G T C A
Reverse Opposite:
A C G T A C G T A C G T A C G T A T C G A C G T A C T G C T G A C T A G A G C T C T G A C T A G A C T G
p-value:1e-10
log p-value:-2.407e+01
Information Content per bp:1.827
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.3 +/- 24.1bp
Average Position of motif in Background55.0 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CYYRYYCACAAAM
-NWAACCACADNN
 A G T C A G T C A G C T C T A G A G T C A G C T A G T C C G T A A T G C C G T A C G T A C G T A G T C A
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CYYRYYCACAAAM
--AAACCACAGAN
 A G T C A G T C A G C T C T A G A G T C A G C T A G T C C G T A A T G C C G T A C G T A C G T A G T C A
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CYYRYYCACAAAM
---CCYMATAAAA
 A G T C A G T C A G C T C T A G A G T C A G C T A G T C C G T A A T G C C G T A C G T A C G T A G T C A
A C G T A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:CYYRYYCACAAAM
-------ACAAAG
 A G T C A G T C A G C T C T A G A G T C A G C T A G T C C G T A A T G C C G T A C G T A C G T A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CYYRYYCACAAAM
---NCYAATAAAA
 A G T C A G T C A G C T C T A G A G T C A G C T A G T C C G T A A T G C C G T A C G T A C G T A G T C A
A C G T A C G T A C G T C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CYYRYYCACAAAM-
------RACAAWGG
 A G T C A G T C A G C T C T A G A G T C A G C T A G T C C G T A A T G C C G T A C G T A C G T A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G

HOXD13/MA0909.1/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CYYRYYCACAAAM-
----CCAATAAAAA
 A G T C A G T C A G C T C T A G A G T C A G C T A G T C C G T A A T G C C G T A C G T A C G T A G T C A A C G T
A C G T A C G T A C G T A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CYYRYYCACAAAM
--AAACCGCAAA-
 A G T C A G T C A G C T C T A G A G T C A G C T A G T C C G T A A T G C C G T A C G T A C G T A G T C A
A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CYYRYYCACAAAM----
--CTCACACAATGGCGC
 A G T C A G T C A G C T C T A G A G T C A G C T A G T C C G T A A T G C C G T A C G T A C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

PB0208.1_Zscan4_2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CYYRYYCACAAAM--
CGAAGCACACAAAATA
 A C G T A G T C A G T C A G C T C T A G A G T C A G C T A G T C C G T A A T G C C G T A C G T A C G T A G T C A A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A