Information for 6-CCAGMAAGGGTGCAGC (Motif 11)

A G T C A G T C C G T A A T C G G T C A C G T A C T G A A C T G C T A G A T C G C G A T A C T G A G T C C G T A A T C G A T G C
Reverse Opposite:
A T C G A T G C A C G T T A C G A G T C C G T A A T G C A G T C A G T C A G C T A C G T A C G T A T G C A C G T A C T G C T A G
p-value:1e-10
log p-value:-2.483e+01
Information Content per bp:1.802
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.6 +/- 17.0bp
Average Position of motif in Background47.4 +/- 9.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:1
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCAGMAAGGGTGCAGC--
---NNVDGGGYGGGGCYN
 A G T C A G T C C G T A A T C G G T C A C G T A C T G A A C T G C T A G A T C G C G A T A C T G A G T C C G T A A T C G A T G C A C G T A C G T
A C G T A C G T A C G T T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCAGMAAGGGTGCAGC
CACAGCAGGGGG-----
 A C G T A G T C A G T C C G T A A T C G G T C A C G T A C T G A A C T G C T A G A T C G C G A T A C T G A G T C C G T A A T C G A T G C
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCAGMAAGGGTGCAGC
CCACACAGCAGGAGA-----
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A T C G G T C A C G T A C T G A A C T G C T A G A T C G C G A T A C T G A G T C C G T A A T C G A T G C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCAGMAAGGGTGCAGC
DCHCAGCAGGRGGCC---
 A C G T A C G T A G T C A G T C C G T A A T C G G T C A C G T A C T G A A C T G C T A G A T C G C G A T A C T G A G T C C G T A A T C G A T G C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CCAGMAAGGGTGCAGC-
-------GGGAGGACNG
 A G T C A G T C C G T A A T C G G T C A C G T A C T G A A C T G C T A G A T C G C G A T A C T G A G T C C G T A A T C G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCAGMAAGGGTGCAGC
CCACACAGCAGGAGA-----
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A T C G G T C A C G T A C T G A A C T G C T A G A T C G C G A T A C T G A G T C C G T A A T C G A T G C
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:7
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CCAGMAAGGGTGCAGC-
------TGGGTGTGGCN
 A G T C A G T C C G T A A T C G G T C A C G T A C T G A A C T G C T A G A T C G C G A T A C T G A G T C C G T A A T C G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

Klf4/MA0039.2/Jaspar

Match Rank:8
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CCAGMAAGGGTGCAGC
------TGGGTGGGGC
 A G T C A G T C C G T A A T C G G T C A C G T A C T G A A C T G C T A G A T C G C G A T A C T G A G T C C G T A A T C G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C

KLF5/MA0599.1/Jaspar

Match Rank:9
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CCAGMAAGGGTGCAGC
------GGGGNGGGGC
 A G T C A G T C C G T A A T C G G T C A C G T A C T G A A C T G C T A G A T C G C G A T A C T G A G T C C G T A A T C G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CCAGMAAGGGTGCAGC
DCTCAGCAGG--------
 A C G T A C G T A G T C A G T C C G T A A T C G G T C A C G T A C T G A A C T G C T A G A T C G C G A T A C T G A G T C C G T A A T C G A T G C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T