Information for 14-GGTGTGAATM (Motif 39)

C T A G A C T G A C G T A C T G A G C T A C T G C G T A C G T A A C G T G T C A
Reverse Opposite:
A C G T C G T A A C G T A C G T A G T C C T G A A G T C C G T A A G T C A G T C
p-value:1e-3
log p-value:-8.027e+00
Information Content per bp:1.906
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif10.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.5 +/- 30.6bp
Average Position of motif in Background58.4 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX21/MA0690.1/Jaspar

Match Rank:1
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--GGTGTGAATM
AAGGTGTGAA--
 A C G T A C G T C T A G A C T G A C G T A C T G A G C T A C T G C G T A C G T A A C G T G T C A
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:2
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-GGTGTGAATM
AGGTGTTAAT-
 A C G T C T A G A C T G A C G T A C T G A G C T A C T G C G T A C G T A A C G T G T C A
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:3
Score:0.82
Offset:-5
Orientation:forward strand
Alignment:-----GGTGTGAATM--
GAAAAGGTGTGAAAATT
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C G T A C T G A G C T A C T G C G T A C G T A A C G T G T C A A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

EOMES/MA0800.1/Jaspar

Match Rank:4
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--GGTGTGAATM-
AAGGTGTGAAAAT
 A C G T A C G T C T A G A C T G A C G T A C T G A G C T A C T G C G T A C G T A A C G T G T C A A C G T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBR1/MA0802.1/Jaspar

Match Rank:5
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-GGTGTGAATM
AGGTGTGAAA-
 A C G T C T A G A C T G A C G T A C T G A G C T A C T G C G T A C G T A A C G T G T C A
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T

TBX2/MA0688.1/Jaspar

Match Rank:6
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--GGTGTGAATM
AAGGTGTGAAA-
 A C G T A C G T C T A G A C T G A C G T A C T G A G C T A C T G C G T A C G T A A C G T G T C A
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T

MGA/MA0801.1/Jaspar

Match Rank:7
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GGTGTGAATM
AGGTGTGA---
 A C G T C T A G A C T G A C G T A C T G A G C T A C T G C G T A C G T A A C G T G T C A
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:8
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--GGTGTGAATM
TAGGTGTGAAG-
 A C G T A C G T C T A G A C T G A C G T A C T G A G C T A C T G C G T A C G T A A C G T G T C A
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--GGTGTGAATM
AAGGTGTKAA--
 A C G T A C G T C T A G A C T G A C G T A C T G A G C T A C T G C G T A C G T A A C G T G T C A
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:10
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GGTGTGAATM
AGGTGTGA---
 A C G T C T A G A C T G A C G T A C T G A G C T A C T G C G T A C G T A A C G T G T C A
C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T