Information for 12-CTCGAAGGAC (Motif 31)

A T G C A C G T A G T C A C T G C T G A C G T A A C T G A T C G C G T A A G T C
Reverse Opposite:
A C T G A C G T A T G C A G T C C G A T A G C T A G T C A C T G C G T A A T C G
p-value:1e-6
log p-value:-1.611e+01
Information Content per bp:1.957
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif58.3
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets55.9 +/- 14.5bp
Average Position of motif in Background50.4 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTCGAAGGAC
--NGAAGC--
 A T G C A C G T A G T C A C T G C T G A C G T A A C T G A T C G C G T A A G T C
A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTCGAAGGAC-
-NTCAAGGTCA
 A T G C A C G T A G T C A C T G C T G A C G T A A C T G A T C G C G T A A G T C A C G T
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTCGAAGGAC---
---CAAGGHCANV
 A T G C A C G T A G T C A C T G C T G A C G T A A C T G A T C G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTCGAAGGAC--
--GGGAGGACNG
 A T G C A C G T A G T C A C T G C T G A C G T A A C T G A T C G C G T A A G T C A C G T A C G T
A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

PB0006.1_Bcl6b_1/Jaspar

Match Rank:5
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------CTCGAAGGAC
NNNATTCCTCGAAAGN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T A G T C A C T G C T G A C G T A A C T G A T C G C G T A A G T C
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTCGAAGGAC--
--CAAAGGTCAG
 A T G C A C G T A G T C A C T G C T G A C G T A A C T G A T C G C G T A A G T C A C G T A C G T
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTCGAAGGAC------
ACTCCAAGTACTTGGAA
 A C G T A T G C A C G T A G T C A C T G C T G A C G T A A C T G A T C G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTCGAAGGAC-
-BTCAAGGTCA
 A T G C A C G T A G T C A C T G C T G A C G T A A C T G A T C G C G T A A G T C A C G T
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTCGAAGGAC
ACWTCAAAGG--
 A C G T A C G T A T G C A C G T A G T C A C T G C T G A C G T A A C T G A T C G C G T A A G T C
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----CTCGAAGGAC--
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T A C G T A C G T A T G C A C G T A G T C A C T G C T G A C G T A A C T G A T C G C G T A A G T C A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T