Information for 3-CGGCTGAGGTCGGCCA (Motif 3)

A T G C A C T G A T C G A G T C C A G T A C T G C G T A A C T G A T C G A G C T A G T C A C T G A C T G A T G C G A T C T C G A
Reverse Opposite:
A C G T C T A G A T C G A G T C A G T C A C T G C T G A A T G C A G T C A C G T A G T C G T C A A C T G A T G C A G T C A T C G
p-value:1e-14
log p-value:-3.270e+01
Information Content per bp:1.819
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.5 +/- 22.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB7A/MA0750.1/Jaspar

Match Rank:1
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CGGCTGAGGTCGGCCA
--TCGGTGGTCGCN--
 A T G C A C T G A T C G A G T C C A G T A C T G C G T A A C T G A T C G A G C T A G T C A C T G A C T G A T G C G A T C T C G A
A C G T A C G T A C G T G T A C C A T G A C T G C A G T T A C G C T A G C A G T A G T C A T C G A G T C T G A C A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:2
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CGGCTGAGGTCGGCCA
AGGGGTCAGAGGTCA----
 A C G T A C G T A C G T A T G C A C T G A T C G A G T C C A G T A C T G C G T A A C T G A T C G A G C T A G T C A C T G A C T G A T G C G A T C T C G A
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CGGCTGAGGTCGGCCA
TAGGGCAAAGGTCA----
 A C G T A C G T A T G C A C T G A T C G A G T C C A G T A C T G C G T A A C T G A T C G A G C T A G T C A C T G A C T G A T G C G A T C T C G A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CGGCTGAGGTCGGCCA
---CAAAGGTCAG---
 A T G C A C T G A T C G A G T C C A G T A C T G C G T A A C T G A T C G A G C T A G T C A C T G A C T G A T G C G A T C T C G A
A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CGGCTGAGGTCGGCCA
TCACCTCTGGGCAG---
 A C G T A T G C A C T G A T C G A G T C C A G T A C T G C G T A A C T G A T C G A G C T A G T C A C T G A C T G A T G C G A T C T C G A
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CGGCTGAGGTCGGCCA
-NTCGGTGGTCGC---
 A T G C A C T G A T C G A G T C C A G T A C T G C G T A A C T G A T C G A G C T A G T C A C T G A C T G A T G C G A T C T C G A
A C G T A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CGGCTGAGGTCGGCCA
TGGGGCAAAGGTCA----
 A C G T A C G T A T G C A C T G A T C G A G T C C A G T A C T G C G T A A C T G A T C G A G C T A G T C A C T G A C T G A T G C G A T C T C G A
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:8
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CGGCTGAGGTCGGCCA
RGKGGGCGGAGC-------
 A C G T A C G T A C G T A T G C A C T G A T C G A G T C C A G T A C T G C G T A A C T G A T C G A G C T A G T C A C T G A C T G A T G C G A T C T C G A
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CGGCTGAGGTCGGCCA
NCGCGGACGTTG----
 A T G C A C T G A T C G A G T C C A G T A C T G C G T A A C T G A T C G A G C T A G T C A C T G A C T G A T G C G A T C T C G A
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CGGCTGAGGTCGGCCA
CCGCCCAAGGGCAG---
 A C G T A T G C A C T G A T C G A G T C C A G T A C T G C G T A A C T G A T C G A G C T A G T C A C T G A C T G A T G C G A T C T C G A
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G A C G T A C G T A C G T