Information for 16-SCAGGCGGSSTGAGGG (Motif 25)

A T C G A T G C G T C A T C A G A T C G G T A C A T C G A C T G T A C G T A G C A C G T A T C G T C G A A T C G T A C G A T C G
Reverse Opposite:
A T G C A T G C A T G C A G C T T A G C G T C A A T C G A T G C G T A C T A G C A C T G T A G C A G T C C A G T A T C G A T G C
p-value:1e-9
log p-value:-2.074e+01
Information Content per bp:1.655
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.18%
Number of Background Sequences with motif98.5
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets54.0 +/- 22.7bp
Average Position of motif in Background53.2 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:SCAGGCGGSSTGAGGG
TCAGNGAGCGTGAC--
 A T C G A T G C G T C A T C A G A T C G G T A C A T C G A C T G T A C G T A G C A C G T A T C G T C G A A T C G T A C G A T C G
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:2
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:SCAGGCGGSSTGAGGG-
------NGCCTGAGGCN
 A T C G A T G C G T C A T C A G A T C G G T A C A T C G A C T G T A C G T A G C A C G T A T C G T C G A A T C G T A C G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:SCAGGCGGSSTGAGGG---
-------GCCTCAGGGCAT
 A T C G A T G C G T C A T C A G A T C G G T A C A T C G A C T G T A C G T A G C A C G T A T C G T C G A A T C G T A C G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:SCAGGCGGSSTGAGGG
----GTGGCGTGACNG
 A T C G A T G C G T C A T C A G A T C G G T A C A T C G A C T G T A C G T A G C A C G T A T C G T C G A A T C G T A C G A T C G
A C G T A C G T A C G T A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.52
Offset:7
Orientation:forward strand
Alignment:SCAGGCGGSSTGAGGG---
-------SCCTSAGGSCAW
 A T C G A T G C G T C A T C A G A T C G G T A C A T C G A C T G T A C G T A G C A C G T A T C G T C G A A T C G T A C G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:SCAGGCGGSSTGAGGG-
------TGCCTGAGGCN
 A T C G A T G C G T C A T C A G A T C G G T A C A T C G A C T G T A C G T A G C A C G T A T C G T C G A A T C G T A C G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:SCAGGCGGSSTGAGGG
---GGCGCGCT-----
 A T C G A T G C G T C A T C A G A T C G G T A C A T C G A C T G T A C G T A G C A C G T A T C G T C G A A T C G T A C G A T C G
A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:8
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:SCAGGCGGSSTGAGGG-
------NGCCTNAGGCN
 A T C G A T G C G T C A T C A G A T C G G T A C A T C G A C T G T A C G T A G C A C G T A T C G T C G A A T C G T A C G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:SCAGGCGGSSTGAGGG--
------TGCCCNGGGGCA
 A T C G A T G C G T C A T C A G A T C G G T A C A T C G A C T G T A C G T A G C A C G T A T C G T C G A A T C G T A C G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:10
Score:0.48
Offset:6
Orientation:forward strand
Alignment:SCAGGCGGSSTGAGGG--
------NGCGTGGGCGGR
 A T C G A T G C G T C A T C A G A T C G G T A C A T C G A C T G T A C G T A G C A C G T A T C G T C G A A T C G T A C G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G