Information for 10-RGGAGCGGCCGCTTCC (Motif 15)

C T G A T C A G A C T G G T C A C T A G G T A C A T C G C T A G A G T C A G T C A C T G A T G C C G A T A G C T A G T C A G T C
Reverse Opposite:
T C A G A C T G C T G A C G T A A T C G G T A C C T A G C T A G G A T C A T G C A C T G A G T C A C G T A G T C A G T C G A C T
p-value:1e-10
log p-value:-2.441e+01
Information Content per bp:1.753
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.2 +/- 16.5bp
Average Position of motif in Background69.0 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:RGGAGCGGCCGCTTCC
--CAACGTCCGCGG--
 C T G A T C A G A C T G G T C A C T A G G T A C A T C G C T A G A G T C A G T C A C T G A T G C C G A T A G C T A G T C A G T C
A C G T A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:RGGAGCGGCCGCTTCC
-GGNGCGNCTGTTNNN
 C T G A T C A G A C T G G T C A C T A G G T A C A T C G C T A G A G T C A G T C A C T G A T G C C G A T A G C T A G T C A G T C
A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.56
Offset:10
Orientation:forward strand
Alignment:RGGAGCGGCCGCTTCC
----------GCTTCC
 C T G A T C A G A C T G G T C A C T A G G T A C A T C G C T A G A G T C A G T C A C T G A T G C C G A T A G C T A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:RGGAGCGGCCGCTTCC-
-----CAGCTGTTTCCT
 C T G A T C A G A C T G G T C A C T A G G T A C A T C G C T A G A G T C A G T C A C T G A T G C C G A T A G C T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T

Gabpa/MA0062.2/Jaspar

Match Rank:5
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:RGGAGCGGCCGCTTCC--
-------NCCACTTCCGG
 C T G A T C A G A C T G G T C A C T A G G T A C A T C G C T A G A G T C A G T C A C T G A T G C C G A T A G C T A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G

ELK4/MA0076.2/Jaspar

Match Rank:6
Score:0.54
Offset:8
Orientation:forward strand
Alignment:RGGAGCGGCCGCTTCC---
--------CCACTTCCGGC
 C T G A T C A G A C T G G T C A C T A G G T A C A T C G C T A G A G T C A G T C A C T G A T G C C G A T A G C T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C T G A T C G A G T C

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:RGGAGCGGCCGCTTCC---
-------ACCACATCCTGT
 C T G A T C A G A C T G G T C A C T A G G T A C A T C G C T A G A G T C A G T C A C T G A T G C C G A T A G C T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:RGGAGCGGCCGCTTCC----
GGYAGCAYDTGCTDCCCNNN
 C T G A T C A G A C T G G T C A C T A G G T A C A T C G C T A G A G T C A G T C A C T G A T G C C G A T A G C T A G T C A G T C A C G T A C G T A C G T A C G T
A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:RGGAGCGGCCGCTTCC
CGGAGC----------
 C T G A T C A G A C T G G T C A C T A G G T A C A T C G C T A G A G T C A G T C A C T G A T G C C G A T A G C T A G T C A G T C
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.51
Offset:9
Orientation:forward strand
Alignment:RGGAGCGGCCGCTTCC---
---------NRYTTCCGGH
 C T G A T C A G A C T G G T C A C T A G G T A C A T C G C T A G A G T C A G T C A C T G A T G C C G A T A G C T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A A G T C C G A T C A G T G A T C A T G C A C T G A T C G G A C T