Information for 11-CACGCAACAGGCT (Motif 20)

A T G C C G T A T A G C A C T G G A T C C T G A G T C A A G T C C G T A A C T G A T C G A G T C A C G T
Reverse Opposite:
G T C A A C T G A T G C A G T C A C G T A C T G A C G T A G C T C T A G A G T C A C T G A C G T A T C G
p-value:1e-8
log p-value:-1.910e+01
Information Content per bp:1.898
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 32.3bp
Average Position of motif in Background80.5 +/- 9.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CACGCAACAGGCT
TBGCACGCAA------
 A C G T A C G T A C G T A T G C C G T A T A G C A C T G G A T C C T G A G T C A A G T C C G T A A C T G A T C G A G T C A C G T
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CACGCAACAGGCT-
-ATGCAACAGGTGG
 A T G C C G T A T A G C A C T G G A T C C T G A G T C A A G T C C G T A A C T G A T C G A G T C A C G T A C G T
A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CACGCAACAGGCT
CACGCA-------
 A T G C C G T A T A G C A C T G G A T C C T G A G T C A A G T C C G T A A C T G A T C G A G T C A C G T
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CACGCAACAGGCT---
-GAGCAACAGGTGGTT
 A T G C C G T A T A G C A C T G G A T C C T G A G T C A A G T C C G T A A C T G A T C G A G T C A C G T A C G T A C G T A C G T
A C G T T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CACGCAACAGGCT-
CCACACAGCAGGAGA
 A C G T A T G C C G T A T A G C A C T G G A T C C T G A G T C A A G T C C G T A A C T G A T C G A G T C A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CACGCAACAGGCT-
CCACACAGCAGGAGA
 A C G T A T G C C G T A T A G C A C T G G A T C C T G A G T C A A G T C C G T A A C T G A T C G A G T C A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0147.1_Max_2/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CACGCAACAGGCT
GTGCCACGCGACTG---
 A C G T A C G T A C G T A C G T A T G C C G T A T A G C A C T G G A T C C T G A G T C A A G T C C G T A A C T G A T C G A G T C A C G T
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CACGCAACAGGCT
GCACGTACCC----
 A C G T A T G C C G T A T A G C A C T G G A T C C T G A G T C A A G T C C G T A A C T G A T C G A G T C A C G T
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CACGCAACAGGCT-
GAGCACAGCAGGACA
 A C G T A T G C C G T A T A G C A C T G G A T C C T G A G T C A A G T C C G T A A C T G A T C G A G T C A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CACGCAACAGGCT
BGCACGTA-------
 A C G T A C G T A T G C C G T A T A G C A C T G G A T C C T G A G T C A A G T C C G T A A C T G A T C G A G T C A C G T
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T