Information for 3-CTCGCGGTCT (Motif 10)

A T G C A C G T A G T C T C A G A G T C A T C G T C A G A G C T A G T C A C G T
Reverse Opposite:
G T C A A C T G T C G A A G T C T A G C A C T G A G T C A C T G G T C A A T C G
p-value:1e-10
log p-value:-2.312e+01
Information Content per bp:1.836
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.63%
Number of Background Sequences with motif79.6
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets54.3 +/- 27.3bp
Average Position of motif in Background50.6 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----CTCGCGGTCT-
ACCACTCTCGGTCAC
 A C G T A C G T A C G T A C G T A T G C A C G T A G T C T C A G A G T C A T C G T C A G A G C T A G T C A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CTCGCGGTCT-
AGTATTCTCGGTTGC
 A C G T A C G T A C G T A C G T A T G C A C G T A G T C T C A G A G T C A T C G T C A G A G C T A G T C A C G T A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

ZBTB33/MA0527.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTCGCGGTCT---
CTCTCGCGAGATCTG
 A C G T A C G T A T G C A C G T A G T C T C A G A G T C A T C G T C A G A G C T A G T C A C G T A C G T A C G T A C G T
A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTCGCGGTCT-
NNAATTCTCGNTNAN
 A C G T A C G T A C G T A C G T A T G C A C G T A G T C T C A G A G T C A T C G T C A G A G C T A G T C A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

RUNX2/MA0511.2/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTCGCGGTCT
-TTGCGGTTT
 A T G C A C G T A G T C T C A G A G T C A T C G T C A G A G C T A G T C A C G T
A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

Tcfl5/MA0632.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTCGCGGTCT
GGCACGTGCC--
 A C G T A C G T A T G C A C G T A G T C T C A G A G T C A T C G T C A G A G C T A G T C A C G T
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTCGCGGTCT
GCTCGGSCTC-
 A C G T A T G C A C G T A G T C T C A G A G T C A T C G T C A G A G C T A G T C A C G T
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CTCGCGGTCT--
----CTGTCTGG
 A T G C A C G T A G T C T C A G A G T C A T C G T C A G A G C T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

RUNX3/MA0684.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTCGCGGTCT
TTTGCGGTTT
 A T G C A C G T A G T C T C A G A G T C A T C G T C A G A G C T A G T C A C G T
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTCGCGGTCT--
--VBSYGTCTGG
 A T G C A C G T A G T C T C A G A G T C A T C G T C A G A G C T A G T C A C G T A C G T A C G T
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G