Information for 10-GCACAAAGGGCTC (Motif 8)

C T A G A G T C G T C A T G A C C G T A C G T A C G T A A C T G A C T G A C T G A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A G T C A G T C A G T C C G A T C G A T A C G T A C T G A C G T A C T G A G T C
p-value:1e-10
log p-value:-2.379e+01
Information Content per bp:1.866
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif7.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.0 +/- 15.2bp
Average Position of motif in Background32.4 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GCACAAAGGGCTC-
--ACAAAGGNBCCT
 C T A G A G T C G T C A T G A C C G T A C G T A C G T A A C T G A C T G A C T G A G T C A C G T A G T C A C G T
A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCACAAAGGGCTC-----
-CGAACAGTGCTCACTAT
 C T A G A G T C G T C A T G A C C G T A C G T A C G T A A C T G A C T G A C T G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCACAAAGGGCTC
-AACAAAGG----
 C T A G A G T C G T C A T G A C C G T A C G T A C G T A A C T G A C T G A C T G A G T C A C G T A G T C
A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCACAAAGGGCTC
TGCCCTNAGGGCA-
 A C G T C T A G A G T C G T C A T G A C C G T A C G T A C G T A A C T G A C T G A C T G A G T C A C G T A G T C
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCACAAAGGGCTC-
NNTNNACAATGGGANNN
 A C G T A C G T A C G T C T A G A G T C G T C A T G A C C G T A C G T A C G T A A C T G A C T G A C T G A G T C A C G T A G T C A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCACAAAGGGCTC
TGCCCTNAGGGCA-
 A C G T C T A G A G T C G T C A T G A C C G T A C G T A C G T A A C T G A C T G A C T G A G T C A C G T A G T C
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCACAAAGGGCTC
TGCCCNNAGGGCA-
 A C G T C T A G A G T C G T C A T G A C C G T A C G T A C G T A A C T G A C T G A C T G A G T C A C G T A G T C
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCACAAAGGGCTC
-RACAAWGG----
 C T A G A G T C G T C A T G A C C G T A C G T A C G T A A C T G A C T G A C T G A G T C A C G T A G T C
A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCACAAAGGGCTC
AAAACAAAGG----
 A C G T C T A G A G T C G T C A T G A C C G T A C G T A C G T A A C T G A C T G A C T G A G T C A C G T A G T C
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCACAAAGGGCTC
VRRACAAWGG----
 A C G T C T A G A G T C G T C A T G A C C G T A C G T A C G T A A C T G A C T G A C T G A G T C A C G T A G T C
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T