Information for 7-HCYVYDGRWA (Motif 4)

G T A C G T A C G A C T T C A G A G T C C T G A C T A G C T G A C G A T C T G A
Reverse Opposite:
A G C T G C T A G A C T G A T C G A C T T C A G A G T C C T G A C A T G C A T G
p-value:1e-14
log p-value:-3.354e+01
Information Content per bp:1.452
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif6.98%
Number of Background Sequences with motif948.9
Percentage of Background Sequences with motif1.98%
Average Position of motif in Targets60.1 +/- 29.2bp
Average Position of motif in Background50.2 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--HCYVYDGRWA--------
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T G T A C G T A C G A C T T C A G A G T C C T G A C T A G C T G A C G A T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--HCYVYDGRWA--------
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T G T A C G T A C G A C T T C A G A G T C C T G A C T A G C T G A C G A T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

INSM1/MA0155.1/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--HCYVYDGRWA
CGCCCCCTGACA
 A C G T A C G T G T A C G T A C G A C T T C A G A G T C C T G A C T A G C T G A C G A T C T G A
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:HCYVYDGRWA
CCTGCTGAGH
 G T A C G T A C G A C T T C A G A G T C C T G A C T A G C T G A C G A T C T G A
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--HCYVYDGRWA
NGTCCCNNGGGA
 A C G T A C G T G T A C G T A C G A C T T C A G A G T C C T G A C T A G C T G A C G A T C T G A
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:6
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----HCYVYDGRWA-
NNNCTTTCCAGGAAA
 A C G T A C G T A C G T A C G T G T A C G T A C G A C T T C A G A G T C C T G A C T A G C T G A C G A T C T G A A C G T
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---HCYVYDGRWA
CCCCCTGCTGTG-
 A C G T A C G T A C G T G T A C G T A C G A C T T C A G A G T C C T G A C T A G C T G A C G A T C T G A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:HCYVYDGRWA-
-CCAAAAATAG
 G T A C G T A C G A C T T C A G A G T C C T G A C T A G C T G A C G A T C T G A A C G T
A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:9
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:HCYVYDGRWA--
KCCAAAAATAGC
 G T A C G T A C G A C T T C A G A G T C C T G A C T A G C T G A C G A T C T G A A C G T A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

MF0008.1_MADS_class/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:HCYVYDGRWA-
-CCATATATGG
 G T A C G T A C G A C T T C A G A G T C C T G A C T A G C T G A C G A T C T G A A C G T
A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G