Information for 13-CCCATTTTGTTAT (Motif 10)

A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C T G A C G T A C G T G C T A A C G T
Reverse Opposite:
C G T A C A G T C G T A G T C A A G T C C G T A C G T A C G T A C G T A A C G T A C T G A C T G A C T G
p-value:1e-8
log p-value:-1.963e+01
Information Content per bp:1.928
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets72.5 +/- 8.7bp
Average Position of motif in Background40.2 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CCCATTTTGTTAT
GCNGCCATCTTG----
 A C G T A C G T A C G T A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C T G A C G T A C G T G C T A A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CCCATTTTGTTAT
TGTTCCCATTGTGTACT
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C T G A C G T A C G T G C T A A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

PB0123.1_Foxl1_2/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCCATTTTGTTAT-----
--NNTTTTGTTTTGATNT
 A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C T G A C G T A C G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

PB0119.1_Foxa2_2/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CCCATTTTGTTAT----
--NCNTTTGTTATTTNN
 A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C T G A C G T A C G T G C T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCCATTTTGTTAT---
-WCATTTTGKCCTCYT
 A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C T G A C G T A C G T G C T A A C G T A C G T A C G T A C G T
A C G T C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCCATTTTGTTAT
NNNCCATTGTGTNAN
 A C G T A C G T A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C T G A C G T A C G T G C T A A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

MF0011.1_HMG_class/Jaspar

Match Rank:7
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CCCATTTTGTTAT
-----ATTGTT--
 A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C T G A C G T A C G T G C T A A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCCATTTTGTTAT
-CCATTGTTYB--
 A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C T G A C G T A C G T G C T A A C G T
A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCCATTTTGTTAT
GCCGCCATCTTG----
 A C G T A C G T A C G T A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C T G A C G T A C G T G C T A A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCCATTTTGTTAT-----
---GTNTTGTTGTGANNT
 A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C T G A C G T A C G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T