Information for 5-AGGCTGCAGGAAC (Motif 9)

C T G A A C T G C A T G G T A C G C A T A T C G T A G C G C T A A C T G A T C G T C G A T G C A G T A C
Reverse Opposite:
C A T G A C G T A G C T A T G C A G T C C G A T A T C G A T G C C G T A C A T G G T A C G T A C A G C T
p-value:1e-11
log p-value:-2.652e+01
Information Content per bp:1.690
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif4.38%
Number of Background Sequences with motif474.5
Percentage of Background Sequences with motif0.99%
Average Position of motif in Targets50.0 +/- 28.6bp
Average Position of motif in Background48.4 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGGCTGCAGGAAC--
RGSMTBCTGGGAAAT
 C T G A A C T G C A T G G T A C G C A T A T C G T A G C G C T A A C T G A T C G T C G A T G C A G T A C A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGGCTGCAGGAAC
TWGTCTGV------
 A C G T C T G A A C T G C A T G G T A C G C A T A T C G T A G C G C T A A C T G A T C G T C G A T G C A G T A C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AGGCTGCAGGAAC-
----ANCAGGATGT
 C T G A A C T G C A T G G T A C G C A T A T C G T A G C G C T A A C T G A T C G T C G A T G C A G T A C A C G T
A C G T A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGGCTGCAGGAAC--
DCHCAGCAGGRGGCC
 C T G A A C T G C A T G G T A C G C A T A T C G T A G C G C T A A C T G A T C G T C G A T G C A G T A C A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGGCTGCAGGAAC---
----NDCAGGAARTNN
 C T G A A C T G C A T G G T A C G C A T A T C G T A G C G C T A A C T G A T C G T C G A T G C A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGGCTGCAGGAAC-
----NACAGGAAAT
 C T G A A C T G C A T G G T A C G C A T A T C G T A G C G C T A A C T G A T C G T C G A T G C A G T A C A C G T
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AGGCTGCAGGAAC--
-----ACAGGAAGTG
 C T G A A C T G C A T G G T A C G C A T A T C G T A G C G C T A A C T G A T C G T C G A T G C A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGGCTGCAGGAAC
CCACACAGCAGGAGA
 A C G T A C G T C T G A A C T G C A T G G T A C G C A T A T C G T A G C G C T A A C T G A T C G T C G A T G C A G T A C
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AGGCTGCAGGAAC-
----NACAGGAAAT
 C T G A A C T G C A T G G T A C G C A T A T C G T A G C G C T A A C T G A T C G T C G A T G C A G T A C A C G T
A C G T A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGGCTGCAGGAAC
-CACAGCAGGGGG
 C T G A A C T G C A T G G T A C G C A T A T C G T A G C G C T A A C T G A T C G T C G A T G C A G T A C
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G