Information for 7-TCGTTTGAAT (Motif 36)

A C G T A T G C T C A G A C G T A G C T A C G T A C T G C G T A C G T A C G A T
Reverse Opposite:
C G T A A C G T A C G T G T A C G T C A C T G A G T C A A G T C A T C G C G T A
p-value:1e-7
log p-value:-1.786e+01
Information Content per bp:1.855
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif10.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets38.5 +/- 23.1bp
Average Position of motif in Background50.6 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.76
Offset:2
Orientation:forward strand
Alignment:TCGTTTGAAT-
--ATTTGAATT
 A C G T A T G C T C A G A C G T A G C T A C G T A C T G C G T A C G T A C G A T A C G T
A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:TCGTTTGAAT---
---TTTGAAACCG
 A C G T A T G C T C A G A C G T A G C T A C G T A C T G C G T A C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TCGTTTGAAT------
NTTNTATGAATGTGNNC
 A C G T A C G T A T G C T C A G A C G T A G C T A C G T A C T G C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

PH0044.1_Homez/Jaspar

Match Rank:4
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------TCGTTTGAAT-
AAAACATCGTTTTTAAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C T C A G A C G T A G C T A C G T A C T G C G T A C G T A C G A T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

PB0178.1_Sox8_2/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCGTTTGAAT--
NNTNTCATGAATGT
 A C G T A C G T A C G T A T G C T C A G A C G T A G C T A C G T A C T G C G T A C G T A C G A T A C G T A C G T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TCGTTTGAAT-
CTCATTTGCATW
 A C G T A C G T A T G C T C A G A C G T A G C T A C G T A C T G C G T A C G T A C G A T A C G T
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TCGTTTGAAT
ANTTCTNNAGAA-
 A C G T A C G T A C G T A C G T A T G C T C A G A C G T A G C T A C G T A C T G C G T A C G T A C G A T
C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCGTTTGAAT---
TATCATTAGAACGCT
 A C G T A C G T A C G T A T G C T C A G A C G T A G C T A C G T A C T G C G T A C G T A C G A T A C G T A C G T A C G T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

PB0083.1_Tcf7_1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TCGTTTGAAT----
NNTTCCTTTGATCTNNA
 A C G T A C G T A C G T A C G T A T G C T C A G A C G T A G C T A C G T A C T G C G T A C G T A C G A T A C G T A C G T A C G T A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCGTTTGAAT--
TTCATTTGCATAT
 A C G T A C G T A T G C T C A G A C G T A G C T A C G T A C T G C G T A C G T A C G A T A C G T A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T