Information for 17-CTTCTSTKTYGTY (Motif 35)

A G T C A G C T A C G T G A T C C A G T T A C G G A C T A C G T A C G T A G C T A T C G C G A T A G C T
Reverse Opposite:
T C G A C G T A A T G C C T G A G T C A G T C A C G T A A T G C G C T A C A T G C G T A C T G A T C A G
p-value:1e-8
log p-value:-1.871e+01
Information Content per bp:1.836
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.3 +/- 22.5bp
Average Position of motif in Background53.7 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF9/MA0653.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTTCTSTKTYGTY
AGTTTCGGTTTCGTT
 A C G T A C G T A G T C A G C T A C G T G A T C C A G T T A C G G A C T A C G T A C G T A G C T A T C G C G A T A G C T
C T G A A T C G C G A T C G A T A C G T G A T C C T A G A T C G C A G T C G A T A C G T G A T C C T A G C G A T C G A T

IRF7/MA0772.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTTCTSTKTYGTY
ANTTTCGCTTTCGN-
 A C G T A C G T A G T C A G C T A C G T G A T C C A G T T A C G G A C T A C G T A C G T A G C T A T C G C G A T A G C T
C G T A A G T C C G A T A C G T C A G T G A T C C T A G A G T C A C G T C G A T A C G T T G A C A C T G C A G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTTCTSTKTYGTY---
NNCTTTGTTTTGNTNNN
 A C G T A G T C A G C T A C G T G A T C C A G T T A C G G A C T A C G T A C G T A G C T A T C G C G A T A G C T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

IRF8/MA0652.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTTCTSTKTYGTY
AGTTTCGGTTTCGN-
 A C G T A C G T A G T C A G C T A C G T G A T C C A G T T A C G G A C T A C G T A C G T A G C T A T C G C G A T A G C T
C T G A T A C G A C G T G C A T A G C T A G T C C T A G A T C G C G A T C G A T A C G T G A T C C T A G C T G A A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTTCTSTKTYGTY
AGTTTCAGTTTC---
 A C G T A C G T A G T C A G C T A C G T G A T C C A G T T A C G G A C T A C G T A C G T A G C T A T C G C G A T A G C T
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTTCTSTKTYGTY
ACTTTCACTTTC---
 A C G T A C G T A G T C A G C T A C G T G A T C C A G T T A C G G A C T A C G T A C G T A G C T A T C G C G A T A G C T
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTTCTSTKTYGTY
GCTTCC--------
 A C G T A G T C A G C T A C G T G A T C C A G T T A C G G A C T A C G T A C G T A G C T A T C G C G A T A G C T
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTTCTSTKTYGTY
TTCTTATCTGT----
 A C G T A C G T A G T C A G C T A C G T G A T C C A G T T A C G G A C T A C G T A C G T A G C T A T C G C G A T A G C T
A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T A C G T A C G T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:9
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CTTCTSTKTYGTY--
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T A C G T G A T C C A G T T A C G G A C T A C G T A C G T A G C T A T C G C G A T A G C T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

Gata4/MA0482.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTTCTSTKTYGTY
TCTTATCTCCC---
 A C G T A G T C A G C T A C G T G A T C C A G T T A C G G A C T A C G T A C G T A G C T A T C G C G A T A G C T
A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C A C G T A C G T A C G T