Information for 16-TTTGGTGCACTATTTT (Motif 28)

A C G T C G A T C G A T A C T G C T A G A C G T A T C G A G T C C G T A G T A C C G A T C G T A A C G T A C G T A C G T A G C T
Reverse Opposite:
C T G A C G T A C G T A G T C A G C A T C G T A A C T G A C G T A C T G A T G C C G T A A G T C A G T C C G T A C G T A C G T A
p-value:1e-8
log p-value:-1.996e+01
Information Content per bp:1.887
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets39.2 +/- 21.5bp
Average Position of motif in Background36.5 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TTTGGTGCACTATTTT-
--CCTTGCAATTTTTNN
 A C G T C G A T C G A T A C T G C T A G A C G T A T C G A G T C C G T A G T A C C G A T C G T A A C G T A C G T A C G T A G C T A C G T
A C G T A C G T A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:TTTGGTGCACTATTTT---
---------CTATTTTTGG
 A C G T C G A T C G A T A C T G C T A G A C G T A T C G A G T C C G T A G T A C C G A T C G T A A C G T A C G T A C G T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

PB0104.1_Zscan4_1/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTTGGTGCACTATTTT
NTNTATGTGCACATNNN-
 A C G T A C G T A C G T C G A T C G A T A C T G C T A G A C G T A T C G A G T C C G T A G T A C C G A T C G T A A C G T A C G T A C G T A G C T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:TTTGGTGCACTATTTT----
--------KCTATTTTTRGH
 A C G T C G A T C G A T A C T G C T A G A C G T A T C G A G T C C G T A G T A C C G A T C G T A A C G T A C G T A C G T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

PB0026.1_Gm397_1/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TTTGGTGCACTATTTT
NNGTATGTGCACATNNN-
 A C G T A C G T A C G T C G A T C G A T A C T G C T A G A C G T A T C G A G T C C G T A G T A C C G A T C G T A A C G T A C G T A C G T A G C T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:6
Score:0.52
Offset:8
Orientation:forward strand
Alignment:TTTGGTGCACTATTTT----
--------GCTATTTTTGGM
 A C G T C G A T C G A T A C T G C T A G A C G T A T C G A G T C C G T A G T A C C G A T C G T A A C G T A C G T A C G T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

MEF2C/MA0497.1/Jaspar

Match Rank:7
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:TTTGGTGCACTATTTT------
-------TTCTATTTTTAGNNN
 A C G T C G A T C G A T A C T G C T A G A C G T A T C G A G T C C G T A G T A C C G A T C G T A A C G T A C G T A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:8
Score:0.51
Offset:8
Orientation:forward strand
Alignment:TTTGGTGCACTATTTT----
--------GCTATTTTTAGC
 A C G T C G A T C G A T A C T G C T A G A C G T A T C G A G T C C G T A G T A C C G A T C G T A A C G T A C G T A C G T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TTTGGTGCACTATTTT
NNNNTGAGCACTGTNNG
 A C G T A C G T C G A T C G A T A C T G C T A G A C G T A T C G A G T C C G T A G T A C C G A T C G T A A C G T A C G T A C G T A G C T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

PB0197.1_Zfp105_2/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TTTGGTGCACTATTTT--
-ATGGTTCAATAATTTTG
 A C G T C G A T C G A T A C T G C T A G A C G T A T C G A G T C C G T A G T A C C G A T C G T A A C G T A C G T A C G T A G C T A C G T A C G T
A C G T C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G