Information for 13-AGSCAGGMARGAWRRM (Motif 24)

C G T A A C T G A T C G A G T C C G T A A C T G A C T G G T A C C T G A C T A G A C T G C G T A C G T A C T A G C T A G G T A C
Reverse Opposite:
A C T G A G T C A G T C G C A T A C G T A G T C A G T C A G C T A C T G A G T C A G T C A C G T A C T G A T G C A G T C A C G T
p-value:1e-9
log p-value:-2.215e+01
Information Content per bp:1.828
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets29.0 +/- 14.6bp
Average Position of motif in Background31.6 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AGSCAGGMARGAWRRM
GGAAGGAAGGAAGGAAGG-
 A C G T A C G T A C G T C G T A A C T G A T C G A G T C C G T A A C T G A C T G G T A C C T G A C T A G A C T G C G T A C G T A C T A G C T A G G T A C
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGSCAGGMARGAWRRM
SCAGYCADGCATGAC---
 A C G T A C G T C G T A A C T G A T C G A G T C C G T A A C T G A C T G G T A C C T G A C T A G A C T G C G T A C G T A C T A G C T A G G T A C
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGSCAGGMARGAWRRM
---AAGGCAAGTGT--
 C G T A A C T G A T C G A G T C C G T A A C T G A C T G G T A C C T G A C T A G A C T G C G T A C G T A C T A G C T A G G T A C
A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGSCAGGMARGAWRRM
--ACAGGAAGTG----
 C G T A A C T G A T C G A G T C C G T A A C T G A C T G G T A C C T G A C T A G A C T G C G T A C G T A C T A G C T A G G T A C
A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGSCAGGMARGAWRRM
-NACAGGAAAT-----
 C G T A A C T G A T C G A G T C C G T A A C T G A C T G G T A C C T G A C T A G A C T G C G T A C G T A C T A G C T A G G T A C
A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGSCAGGMARGAWRRM
-NDCAGGAARTNN---
 C G T A A C T G A T C G A G T C C G T A A C T G A C T G G T A C C T G A C T A G A C T G C G T A C G T A C T A G C T A G G T A C
A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGSCAGGMARGAWRRM
-NACAGGAAAT-----
 C G T A A C T G A T C G A G T C C G T A A C T G A C T G G T A C C T G A C T A G A C T G C G T A C G T A C T A G C T A G G T A C
A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AGSCAGGMARGAWRRM
GCAGCCAAGCGTGACN--
 A C G T A C G T C G T A A C T G A T C G A G T C C G T A A C T G A C T G G T A C C T G A C T A G A C T G C G T A C G T A C T A G C T A G G T A C
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGSCAGGMARGAWRRM
CWGGCGGGAA-------
 A C G T C G T A A C T G A T C G A G T C C G T A A C T G A C T G G T A C C T G A C T A G A C T G C G T A C G T A C T A G C T A G G T A C
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:AGSCAGGMARGAWRRM
----GGGCGGGAAGG-
 C G T A A C T G A T C G A G T C C G T A A C T G A C T G G T A C C T G A C T A G A C T G C G T A C G T A C T A G C T A G G T A C
A C G T A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T