Information for 11-CCCTCTGCCCCGC (Motif 18)

A G T C A G T C A T G C A C G T A G T C A C G T A C T G A G T C A G T C A T G C A G T C A C T G T A G C
Reverse Opposite:
A C T G A G T C A C T G A T C G A C T G A C T G A G T C T G C A A C T G C G T A A T C G C T A G A C T G
p-value:1e-10
log p-value:-2.413e+01
Information Content per bp:1.891
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.6 +/- 27.7bp
Average Position of motif in Background52.8 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0202.1_Zfp410_2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CCCTCTGCCCCGC---
TCACCCCGCCCCAAATT
 A C G T A G T C A G T C A T G C A C G T A G T C A C G T A C T G A G T C A G T C A T G C A G T C A C T G T A G C A C G T A C G T A C G T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCCTCTGCCCCGC
TGACCTTTGCCCTAN
 A C G T A C G T A G T C A G T C A T G C A C G T A G T C A C G T A C T G A G T C A G T C A T G C A G T C A C T G T A G C
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCCTCTGCCCCGC
TGACCTTTGCCCTA-
 A C G T A C G T A G T C A G T C A T G C A C G T A G T C A C G T A C T G A G T C A G T C A T G C A G T C A C T G T A G C
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCCTCTGCCCCGC
TGACCTTTGCCCCA-
 A C G T A C G T A G T C A G T C A T G C A C G T A G T C A C G T A C T G A G T C A G T C A T G C A G T C A C T G T A G C
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCCTCTGCCCCGC
TGACCTCTGACCCCN
 A C G T A C G T A G T C A G T C A T G C A C G T A G T C A C G T A C T G A G T C A G T C A T G C A G T C A C T G T A G C
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCCTCTGCCCCGC---
ATCCCCGCCCCTAAAA
 A G T C A G T C A T G C A C G T A G T C A C G T A C T G A G T C A G T C A T G C A G T C A C T G T A G C A C G T A C G T A C G T
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

EGR1/MA0162.2/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCCTCTGCCCCGC-
CCCCCGCCCCCGCC
 A G T C A G T C A T G C A C G T A G T C A C G T A C T G A G T C A G T C A T G C A G T C A C T G T A G C A C G T
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCCTCTGCCCCGC
-CCCCTCCCCCAC
 A G T C A G T C A T G C A C G T A G T C A C G T A C T G A G T C A G T C A T G C A G T C A C T G T A G C
A C G T T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CCCTCTGCCCCGC----
-----GGCCCCGCCCCC
 A G T C A G T C A T G C A C G T A G T C A C G T A C T G A G T C A G T C A T G C A G T C A C T G T A G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCCTCTGCCCCGC-------
---TACGCCCCGCCACTCTG
 A G T C A G T C A T G C A C G T A G T C A C G T A C T G A G T C A G T C A T G C A G T C A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G