Information for 8-AATAAACTGGAGT (Motif 12)

C G T A C G T A A C G T C G T A C G T A C G T A A G T C A C G T T C A G A T C G C G T A A C T G A G C T
Reverse Opposite:
C T G A A G T C A C G T A T G C A G T C C G T A A C T G A C G T C G A T A C G T C G T A A C G T A C G T
p-value:1e-11
log p-value:-2.560e+01
Information Content per bp:1.933
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.4 +/- 14.9bp
Average Position of motif in Background68.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxq1/MA0040.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AATAAACTGGAGT
AATAAACAATN--
 C G T A C G T A A C G T C G T A C G T A C G T A A G T C A C G T T C A G A T C G C G T A A C T G A G C T
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AATAAACTGGAGT
GCAATAAAA------
 A C G T A C G T C G T A C G T A A C G T C G T A C G T A C G T A A G T C A C G T T C A G A T C G C G T A A C T G A G C T
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----AATAAACTGGAGT
TAGGTAATAAAATTCA--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A C G T A A G T C A C G T T C A G A T C G C G T A A C T G A G C T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AATAAACTGGAGT
CCAATAAAAA-----
 A C G T A C G T C G T A C G T A A C G T C G T A C G T A C G T A A G T C A C G T T C A G A T C G C G T A A C T G A G C T
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T A C G T A C G T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AATAAACTGGAGT
AATGCAATAAAATTTAT-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A C G T A A G T C A C G T T C A G A T C G C G T A A C T G A G C T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AATAAACTGGAGT
GTCATAAAAN-----
 A C G T A C G T C G T A C G T A A C G T C G T A C G T A C G T A A G T C A C G T T C A G A T C G C G T A A C T G A G C T
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T A C G T A C G T A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AATAAACTGGAGT
GGTAATAAAAA-----
 A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A C G T A A G T C A C G T T C A G A T C G C G T A A C T G A G C T
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AATAAACTGGAGT
TGTAAACAGGA--
 C G T A C G T A A C G T C G T A C G T A C G T A A G T C A C G T T C A G A T C G C G T A A C T G A G C T
C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AATAAACTGGAGT
CCAATAAAAC-----
 A C G T A C G T C G T A C G T A A C G T C G T A C G T A C G T A A G T C A C G T T C A G A T C G C G T A A C T G A G C T
T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C A C G T A C G T A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AATAAACTGGAGT
CCAATAAAAA-----
 A C G T A C G T C G T A C G T A A C G T C G T A C G T A C G T A A G T C A C G T T C A G A T C G C G T A A C T G A G C T
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T A C G T