Information for 1-TTYCYTCACTCACTTT (Motif 1)

A C G T A C G T G A C T T A G C A G T C A C G T G T A C G T C A A T G C C G A T A G T C C T G A A T G C A C G T A C G T A C G T
Reverse Opposite:
G T C A C G T A C G T A T A C G A G C T A C T G G C T A A T C G A C G T C A T G C G T A T C A G A C T G C T G A C G T A C G T A
p-value:1e-16
log p-value:-3.767e+01
Information Content per bp:1.750
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.7 +/- 26.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.55
Offset:8
Orientation:forward strand
Alignment:TTYCYTCACTCACTTT--
--------ACCACTTGAA
 A C G T A C G T G A C T T A G C A G T C A C G T G T A C G T C A A T G C C G A T A G T C C T G A A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

NKX2-8/MA0673.1/Jaspar

Match Rank:2
Score:0.53
Offset:9
Orientation:forward strand
Alignment:TTYCYTCACTCACTTT--
---------CCACTTGAA
 A C G T A C G T G A C T T A G C A G T C A C G T G T A C G T C A A T G C C G A T A G T C C T G A A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

FOS::JUN/MA0099.2/Jaspar

Match Rank:3
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TTYCYTCACTCACTTT
-----TGACTCA----
 A C G T A C G T G A C T T A G C A G T C A C G T G T A C G T C A A T G C C G A T A G T C C T G A A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T A C G T A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:4
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TTYCYTCACTCACTTT
---NATGAGTCACC--
 A C G T A C G T G A C T T A G C A G T C A C G T G T A C G T C A A T G C C G A T A G T C C T G A A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:5
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TTYCYTCACTCACTTT-----
-----TAAGCCACTTGAAATT
 A C G T A C G T G A C T T A G C A G T C A C G T G T A C G T C A A T G C C G A T A G T C C T G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:TTYCYTCACTCACTTT-
-------MRSCACTYAA
 A C G T A C G T G A C T T A G C A G T C A C G T G T A C G T C A A T G C C G A T A G T C C T G A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

JUN(var.2)/MA0489.1/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TTYCYTCACTCACTTT--
----ATGAGTCATNTNNT
 A C G T A C G T G A C T T A G C A G T C A C G T G T A C G T C A A T G C C G A T A G T C C T G A A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A A C G T A C T G C G T A T A C G C G A T A G T C C G T A A G C T G A T C G A C T G A T C G A T C G A C T

NKX3-2/MA0122.2/Jaspar

Match Rank:8
Score:0.52
Offset:8
Orientation:forward strand
Alignment:TTYCYTCACTCACTTT-
--------ACCACTTAA
 A C G T A C G T G A C T T A G C A G T C A C G T G T A C G T C A A T G C C G A T A G T C C T G A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A

BATF::JUN/MA0462.1/Jaspar

Match Rank:9
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:TTYCYTCACTCACTTT
-----TGAGTCATTTC
 A C G T A C G T G A C T T A G C A G T C A C G T G T A C G T C A A T G C C G A T A G T C C T G A A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C

ISL2/MA0914.1/Jaspar

Match Rank:10
Score:0.51
Offset:9
Orientation:forward strand
Alignment:TTYCYTCACTCACTTT-
---------GCACTTAA
 A C G T A C G T G A C T T A G C A G T C A C G T G T A C G T C A A T G C C G A T A G T C C T G A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A